Gene YpAngola_A1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1815 
SymbolnuoB 
ID5800286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1881145 
End bp1881822 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content50% 
IMG OID641339748 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001606303 
Protein GI162419739 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATA CGCTCACCCG CATAGACCCT AACGGTGAGA ATGACCGTTA CCCCCTGCAA 
ACTCAGGAAA CCGTCAGCGG CGATCCTCTC GAGCAACATG TCCACCGTAG TGTTTACATG
GGTAAACTTG AAAACGCCAT GCATGACATG GTGAACTGGG GGCGTAAAAA CTCTCTTTGG
CCTTATAACT TCGGCCTTTC TTGTTGTTAT GTCGAGATGG TGACTTCGTT CACGGCGGTA
CATGACGTCG CCCGTTTCGG TGCTGAAGTC TTGCGTGCAT CCCCACGTCA GGCCGATTTT
ATGGTGGTGG CCGGAACCTG CTTTACCAAA ATGGCCCCGG TTATTCAGCG TTTATATGAA
CAAATGCTGG AACCAAAATG GGTTATTTCC ATGGGGGCCT GCGCGAATTC TGGTGGCATG
TATGATATCT ACTCCGTTGT GCAAGGTGTG GATAAATTCC TACCAGTAGA TGTCTATATT
CCTGGCTGTC CACCGCGCCC GGAAGCGTAT ATGCAAGCGC TATTGCTATT GCAGGAATCC
ATTGGTAAAG AGCGCCGTCC TCTCTCTTGG GTTGTCGGTG ACCAAGGTGT CTACCGTGCC
AATATGCAGC CAGAAAGAGA ACGTAAGCAT GCTGAACGAA TTGCGGTAAC TAACCTGCGC
ACACCTGACG AGATTTAA
 
Protein sequence
MDYTLTRIDP NGENDRYPLQ TQETVSGDPL EQHVHRSVYM GKLENAMHDM VNWGRKNSLW 
PYNFGLSCCY VEMVTSFTAV HDVARFGAEV LRASPRQADF MVVAGTCFTK MAPVIQRLYE
QMLEPKWVIS MGACANSGGM YDIYSVVQGV DKFLPVDVYI PGCPPRPEAY MQALLLLQES
IGKERRPLSW VVGDQGVYRA NMQPERERKH AERIAVTNLR TPDEI