| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1814 |
|---|
| Symbol | nuoCD |
|---|
| ID | 5800285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1879208 |
|---|
| End bp | 1881004 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339747 |
|---|
| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
|---|
| Protein accession | YP_001606302 |
|---|
| Protein GI | 162421544 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.394715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT TAACGACGTC CGACAGCTTA CAGCCTGCAT GGCAAACCCG TGATCATCTT
GATGATCCGG TGATTGGTGA ATTGTCGAAC CGTTTTGGGC CAGAGGCCTT TGTTGTGCAA
GCAACCCGTA CCGGTATGCC CGTGGTATGG GTGAAGCGTG AACAACTGCT GGAAGTAATG
TCGTTTCTGA GAAAACAACC AAAGCCTTAT GTCATGCTGT TCGATTTGCA TGGCGTGGAT
GAGCGTCTAC GTACCCACAG CCAGGGCCTC CCTGATGCGG ACTTTTCTGT TTTCTATCAT
CTGCTTTCCA TTGAACGTAA CCGCGACATT ATGCTGAAAG TGGCACTGTC TGAAAAAGAC
TTACATGTGT CCACAGCAAC CAAAATTTTT CCCAATGCCA ACTGGTATGA GCGGGAAACA
TGGGAGATGT TCGGTATTAC CTTTGATGGT CACCCGCATC TGACGCGTAT CATGATGCCG
CAGAGTTGGG AAGGTCATCC GCTGCGTAAA GATTACCCCG CCCGGGCGAC CGAGTTCGAT
CCCTATGTGC TGACAAAGCA GAAAGAAGAT CTGGAAATGG AATCCCTGAC CTTTAAGCCA
GAAGATTGGG GCATGAAACG CGGGACTGAA AACGAGGACT TCATGTTCCT TAACCTCGGC
CCAAACCACC CCTCTTCACA CGGTGCTTTC CGTATCGTGT TGCAGCTTGA TGGTGAAGAA
ATTATCGACT GCGTACCGGA TGTGGGTTAC CACCACCGTG GTGCGGAGAA GATGGGCGAG
CGCCAGTCCT GGCACAGCTA CATTCCTTAC ACCGACCGTA TCGAATACTT GGGCGGTTGT
GTAAACGAAA TGCCTTACGT GTTGGCGGTT GAAAAACTGG CGGGCATCGT GGTGCCCGAT
CGCGTGAACA CCATCCGGGT CATGCTGTCA GAATTATTCC GAATCAACAG TCACTTACTG
TATATCAGTA CCTTTATTCA AGACGTCGGT GCCATGACGC CCGTGTTCTT TGCCTTTACT
GACCGTCAGA AAGTGTACGA CGTGATCGAG GCGATTACCG GGTTCCGTAT GCACCCGGCC
TGGTTCCGCA TTGGTGGTGT GGCGCACGAC CTGCCACGCG GCTGGGAACG TTTGCTACGC
GACTTCCTTG ACTGGATGCC AAAACGTCTG GATTCCTACG TTAAAGCCGC TTTGCAGAAC
AGCATCCTGA AAGGGCGCTC CGTTGGTGTG GCCGCGTATA ATGCGAAAGA GGCGTTAGAG
TGGGGCGTCA CCGGTGCGGG CTTGCGTGCT ACCGGGGTTG AATTTGACGT GCGCAAATGG
CGTCCGTATT CCGGTTATGA GAACTTTGAT TTTGAAGTGC CTGTCGGTAA CAACGGCGAT
TGCTATGACC GCGTGATGCT GAAAGTGGAA GAGTTACGTC AAAGCCTGCG TATTCTGGAG
CAATGTTATA AAAACATGCC AGAAGGACCA TTCAAGGCTG ATCATCCACT GACGACACCA
CCACCAAAAG AGCGCACGCT TCAACATATC GAAACGCTAA TCACTCACTT CCTGCAAGTG
TCATGGGGGC CAGTGATGCC AGCGAACGAA TCTTTCCAGA TGATTGAAGC AACCAAAGGG
ATTAACAGCT ATTACCTGAC CAGTGACGGC AGCACCATGA GTTACCGCAC CCGGATACGG
ACCCCAAGCT ATGCCCATTT GCAGCAGATC CCATCGGTTA TCCGTGGCAG TTTGGTATCT
GACCTGATCG TCTATCTGGG CAGTATCGAT TTTGTAATGT CTGATGTGGA CCGCTAA
|
|---|
| Protein sequence | MTDLTTSDSL QPAWQTRDHL DDPVIGELSN RFGPEAFVVQ ATRTGMPVVW VKREQLLEVM
SFLRKQPKPY VMLFDLHGVD ERLRTHSQGL PDADFSVFYH LLSIERNRDI MLKVALSEKD
LHVSTATKIF PNANWYERET WEMFGITFDG HPHLTRIMMP QSWEGHPLRK DYPARATEFD
PYVLTKQKED LEMESLTFKP EDWGMKRGTE NEDFMFLNLG PNHPSSHGAF RIVLQLDGEE
IIDCVPDVGY HHRGAEKMGE RQSWHSYIPY TDRIEYLGGC VNEMPYVLAV EKLAGIVVPD
RVNTIRVMLS ELFRINSHLL YISTFIQDVG AMTPVFFAFT DRQKVYDVIE AITGFRMHPA
WFRIGGVAHD LPRGWERLLR DFLDWMPKRL DSYVKAALQN SILKGRSVGV AAYNAKEALE
WGVTGAGLRA TGVEFDVRKW RPYSGYENFD FEVPVGNNGD CYDRVMLKVE ELRQSLRILE
QCYKNMPEGP FKADHPLTTP PPKERTLQHI ETLITHFLQV SWGPVMPANE SFQMIEATKG
INSYYLTSDG STMSYRTRIR TPSYAHLQQI PSVIRGSLVS DLIVYLGSID FVMSDVDR
|
|---|
| |