Gene YpAngola_A1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1812 
SymbolnuoF 
ID5800283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1877260 
End bp1878645 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content54% 
IMG OID641339746 
ProductNADH dehydrogenase I subunit F 
Protein accessionYP_001606301 
Protein GI162418531 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.848425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA ATTCAGGAAC GACCAAGGAA ATTATCCGGA CGCCAGAAAT GCACCCGCTG 
ACCTGGCGTT TGCGCGATGA CAAACAGCCC GTGTGGCTGG ATGAGTATCG CAGCAAAAAC
GGCTATGCCG GGGCAGAAAA AGCGTTAAAA GGCATGGCGC CCACTGATGT TGTTAACGTT
GTCAAAGACG CTGGCCTGAA AGGGCGTGGC GGCGCAGGTT TCTCCACTGG TTTGAAGTGG
AGCCTGATGC CCAAAGACGA CAGTATGAAC ATCCGCTATC TGCTGTGTAA CGCTGATGAG
ATGGAGCCAG GCACCTATAA AGACCGTCTG CTGATGGAGC AATTGCCTCA TCTGCTGGTG
GAGGGGATGC TGATCAGTGC CTTCGCGCTG AAAGCCTACC GTGGCTATAT CTTCCTGCGT
GGCGAATATA TTGAAGCGGC AGTGCATTTA CGTCGGGCGA TTGCTGAGGC CACCGAAGCC
GGCTTGCTGG GCAAAAACAT CATGGGCAGT GGTTTTGATT TCGAACTGAT TGTCCATACC
GGTGCGGGTC GTTATATCTG TGGTGAAGAA ACGGCGCTGA TTAACTCACT GGAAGGCCGC
CGTGCTAACC CGCGTTCTAA GCCGCCGTTC CCGGCCTCTT CCGGTGTCTG GGGCAAACCG
ACTTGCGTGA ATAACGTTGA AACCCTGTGT AACGTACCGG CCATTATTGA ACATGGCGTT
GAGTGGTATC AGGGGATCAC TGCCGGTAAG AGTAACGATG CCGGAACCAA ACTGATGGGC
TTCTCGGGTC GGGTGAAAAA TCCGGGTCTG TGGGAATTGC CGTTTGGGAT CACCGCCCGT
GAGATTCTGG AAGATTACGC TGGCGGTATG CGCGATGGCT TGAAATTTAA AGCCTGGCAG
CCGGGCGGGG CGGGTACCGA TTTTCTGACT GCTGACCATC TGGATTTGCC GATGGATTTT
GAGAATATTG CTAAAGCAGG TAGCCGGTTA GGCACCGCGT TGGCGATGGC GGTAGATCAC
GAAATCGGCA TGGTGTCTTT GGTGCGCAAT CTGGAAGAGT TCTTCTCCCG TGAGTCTTGT
GGCTGGTGTA CACCGTGTCG CGATGGTTTG CCATGGAGTG TGAAGATCTT ACGTGCATTA
GAGCGTGGTG AAGGCCAGCC GGGTGATATC GAAACGCTAG AGCAACTGTG CCGCTTCTTA
GGGCCGGGTA AAACCTTCTG TGCTCATGCG CCAGGTGCGG TTGAACCCCT ACAAAGTGCG
ATTAAATATT TCCGGGACGA ATTCGAAGCC GGGATCGCCG TTAAGGCCTA TGAATCTGGA
ATGACGAGCG GCAACACCCG AGCCATAGCC GGTATTCAAC CTAATCTATT AAAAGCGCGC
TGGTAG
 
Protein sequence
MTINSGTTKE IIRTPEMHPL TWRLRDDKQP VWLDEYRSKN GYAGAEKALK GMAPTDVVNV 
VKDAGLKGRG GAGFSTGLKW SLMPKDDSMN IRYLLCNADE MEPGTYKDRL LMEQLPHLLV
EGMLISAFAL KAYRGYIFLR GEYIEAAVHL RRAIAEATEA GLLGKNIMGS GFDFELIVHT
GAGRYICGEE TALINSLEGR RANPRSKPPF PASSGVWGKP TCVNNVETLC NVPAIIEHGV
EWYQGITAGK SNDAGTKLMG FSGRVKNPGL WELPFGITAR EILEDYAGGM RDGLKFKAWQ
PGGAGTDFLT ADHLDLPMDF ENIAKAGSRL GTALAMAVDH EIGMVSLVRN LEEFFSRESC
GWCTPCRDGL PWSVKILRAL ERGEGQPGDI ETLEQLCRFL GPGKTFCAHA PGAVEPLQSA
IKYFRDEFEA GIAVKAYESG MTSGNTRAIA GIQPNLLKAR W