| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1785 |
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| Symbol | menD |
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| ID | 5800256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 1848041 |
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| End bp | 1849744 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641339719 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_001606274 |
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| Protein GI | 162421028 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.468181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAA GTGTTTTTAA CCGTCGTTGG GCGGCACTGC TACTGGAGGC TTTGACCCGC
CACGGTGTGC GTCATATCTG TATTGCCCCA GGGTCTCGCT CTACACCGTT AACGTTAGCG
GCTGCCGCTA ATCCGTCGTT GGTTTGCCAT ACCCATTTTG ATGAGCGCGG TCTGGGCCAT
CTGGCTCTGG GGCTGGCGAA GGCCTCAACA GAACCGGTGG CGGTCATTGT CACCTCGGGT
ACGGCGGTGG CGAATCTTTA TCCTGCGCTA ATCGAAGCGG GGTTAACGGG TGAGCGGCTG
ATATTATTGA CCGCTGATCG CCCACCGGAG TTAATCGATT GCGGTGCCAA TCAGGCTATC
CGCCAGCAGG GGCTGTTTGC CAGCCATCCA ACCCTAAGTG TTAATCTCCC CAGACCGACG
CCCGATATCT CTGCCCGTTG GTTGGTTTCC ACACTCGACA GCGCGATGGC GCAATTGCAA
CATGGCGCTT TGCACATTAA TTGTCCCTTT GCTGAACCAC TGTATGGGGG GGATGAGCAA
CAGTATGCCG ACTGGTCTGC CTCGCTGGGC GATTGGTGGC AGGATTGTCA CCCATGGCTG
CGTCAAACCT GTTACCCGCC CTCTCTTTAT CAACCACCAG CACAGCAAGC TGACTGGTTT
TTCTGGCGGC AAAAACGTGG CGTCGTGATT GCCGGACGGA TGGGCGCGCA AGAGGGTAGG
CAACTGACCG CATGGGCTGC AATGCTGGGC TGGCCACTGA TTGGCGATGT ATTGTCACAA
ACCGGTCAGC CATTGCCTTG TGCTGACTTA TGGCTGGCGC ACCCACGGGC GCAAGAAACC
CTCGCTCAAG CACAGATGGT GTTGCAATTT GGCAGCAGTC TGACCAGTAA GCGCCTTTTA
CAATGGCAGA CCGCATGTCA GCCACAGGAA TACTGGCTGG TGGATAGCGC CCCAGGCCGC
CTTGATCCTG CTAACCATCG TGGCCGACGT ATTATTTGCC CGGTGGGCGA GTGGTTGAGT
CGGCACCCCG CGCAGCGGCG TACACCTTGG GCCACGGAAC TGGCGGCATA TTCGGAAAGT
GCGCAAGCAC AGGTGATCGA GACGCTGGCC GGCCAATTCA GTGAGGCCGC CGTGGCACAT
CAGCTCGCGG AATTATTACC GGATAACGGC CAGCTATTTG TTGGCAACAG TTTGATTGTC
CGGTTGATTG ATGCGCTGGG GCAGCTACCC GCAGGCTATC CGGTTTACAG CAATCGGGGG
GCCAGCGGTA TCGATGGTTT GCTGTCAACC GCCGCCGGTG TACAGCGCGC GACGGCGAAA
CCGACATTAG CTATCGTCGG TGATTTGTCT GCCTTATATG ACCTTAATGC GCTGGCACTT
TTGCGCCAGA GCTCGGCACC GATGGTGCTA CTGGTGATCA ATAACAATGG GGGGCAGATT
TTCTCTTTAT TGCCAACGCC AGAGGCCGAG CGCCAGCGTT TCTACTGTAT GCCGCAGGAT
GTGAACTTCG AACACGCGGC GGTTATGTTC AGCTTAGGTT ATGCTCGCCC TAATAGCTGG
CCTCAGCTAC GGGAGCTAGT GCATCAATGC TGGCTACGGG GGGGAACCAC GCTGATTGAA
GTCCAGGTGC CACCAAGTCA GGGGGCAGAA ACACTGCAAC AGTTAGTACA ACAGGTGACA
TTAATACCGC AGGTGGCCCC ATGA
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| Protein sequence | MSTSVFNRRW AALLLEALTR HGVRHICIAP GSRSTPLTLA AAANPSLVCH THFDERGLGH
LALGLAKAST EPVAVIVTSG TAVANLYPAL IEAGLTGERL ILLTADRPPE LIDCGANQAI
RQQGLFASHP TLSVNLPRPT PDISARWLVS TLDSAMAQLQ HGALHINCPF AEPLYGGDEQ
QYADWSASLG DWWQDCHPWL RQTCYPPSLY QPPAQQADWF FWRQKRGVVI AGRMGAQEGR
QLTAWAAMLG WPLIGDVLSQ TGQPLPCADL WLAHPRAQET LAQAQMVLQF GSSLTSKRLL
QWQTACQPQE YWLVDSAPGR LDPANHRGRR IICPVGEWLS RHPAQRRTPW ATELAAYSES
AQAQVIETLA GQFSEAAVAH QLAELLPDNG QLFVGNSLIV RLIDALGQLP AGYPVYSNRG
ASGIDGLLST AAGVQRATAK PTLAIVGDLS ALYDLNALAL LRQSSAPMVL LVINNNGGQI
FSLLPTPEAE RQRFYCMPQD VNFEHAAVMF SLGYARPNSW PQLRELVHQC WLRGGTTLIE
VQVPPSQGAE TLQQLVQQVT LIPQVAP
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