| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1728 |
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| Symbol | cas1 |
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| ID | 5800199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 1782294 |
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| End bp | 1783274 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641339666 |
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| Product | hypothetical protein |
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| Protein accession | YP_001606221 |
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| Protein GI | 162418150 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03637] CRISPR-associated endonuclease Cas1, YPEST subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00792911 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000413169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAACG CTATTCATTC CTCTGATTTG AAAACGATCC TGCATTCAAA ACGATCCAAT
ATTTACTATT TAGAATATTG CCGTGTATTG GTTAATGGTG GGCGAGTTGA ATATGTCACC
GATGAAGGTA AACAATCCCT TTACTGGAAT ATCCCCATAG CGAACACCAC CGTTATTATG
CTGGGAACCG GGACTTCGGT GACTCAGGCT GCTATGCGTG AGTTTGCCCG AGCCGGGGTC
TTAGTCGGTT TTTGTGGCGG GGGTGGGACG CCGCTTTTTG CGGCTAATGA CGTAGAGGTC
AATGTCTCGT GGCTCACTGC ACAAAGCGAA TACCGGCCAA CCGAGTATCT GCACGATTGG
GTCAGTTTCT GGTTCGATGA TGAAAAAAGA CTGGCAGCAG CAGTGGCTTT CCAGCGCATC
AGGATCGCCC AAATTCAACA ACATTGGCTC AGCAGCCACA TACAGCGCGA ATCTCTTTTT
CCGGTTAATC ACGATCAATT ATTATTTATC CTCACCCGTT TTGAGCAAAA TTTAGCAAAT
TGTCTCACCA GTAATGACCT TATGGTTCAG GAAGCGGTAT TAACAAAGGC ACTCTATAAA
CTGGCTGCTA ATACAGTGAA TTACGGCGAT TTCACCCGCG CTAAACGCGG TGGGGGCATC
GATCTAGCTA ATCGTTTTCT CGATCACGGA AATTATCTCG CCTATGGCTT AGCGGCGACG
GCGACATGGG TTATTGGCTT ACCCCATGGT CTGTCTGTTT TACACGGTAA GACCCGGCGT
GGTGGTTTGG TCTTTGATGT GGCCGATTTA ATTAAAGATG CGCTGGTGCT ACCGCAGGCA
TTTATTGCCG CCATGCAGGG AGAAGAAGAG CAAGAATTTC GTCAGCGCTG CATTAGCGGG
TTTCAACGAA CCGAAGCGCT GGATGTGATG ATTGATGGAA TAAAAGAAAC GGCAGCGTTA
TGTAGCCAGG TTCCGCGATG A
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| Protein sequence | MENAIHSSDL KTILHSKRSN IYYLEYCRVL VNGGRVEYVT DEGKQSLYWN IPIANTTVIM
LGTGTSVTQA AMREFARAGV LVGFCGGGGT PLFAANDVEV NVSWLTAQSE YRPTEYLHDW
VSFWFDDEKR LAAAVAFQRI RIAQIQQHWL SSHIQRESLF PVNHDQLLFI LTRFEQNLAN
CLTSNDLMVQ EAVLTKALYK LAANTVNYGD FTRAKRGGGI DLANRFLDHG NYLAYGLAAT
ATWVIGLPHG LSVLHGKTRR GGLVFDVADL IKDALVLPQA FIAAMQGEEE QEFRQRCISG
FQRTEALDVM IDGIKETAAL CSQVPR
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