Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1720 |
Symbol | |
ID | 5800191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1771706 |
End bp | 1773064 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641339659 |
Product | major facilitator transporter |
Protein accession | YP_001606214 |
Protein GI | 162418553 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0929915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00114848 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACAT TACCATCAGA AAAAATCAGG ATGGACGATG TCCCCCTAAA TCGCTTCCAT ATAAGAATTG CCGGGCTAAC TTTTGGCGCA CACTTTATCG ATGGCTATAT CTTAGGTCTG ATTGGCTTTG CATTAATTCA ACTCAAACCC ATAATGGCAC TTACACCATT ATGGGAGGGA TTACTCGGAT CAGCCGCGCT GATCGGGCTA TTTCTAGGCA GCCTAATATT AGGCTGGATC TCAGATTACA TTGGCCGCCA GAAAATTTTC AGTTTCAGTT TTGTCATCAT TACCTTAGCC TCAGCACTGC AATTTTTTGC CAGTACACCA GAACAGTTAT TTATTTTGCG GGTCATCGTT GGTATTGGTA TCGGTGGCGA TTACACGGTG GGACATACTT TATTAGCTGA ATTTTCACCA CGAAAACATC GCGGGGTCTT ATTGGGCGCA TTCAGTGTCA TTTGGACCTT TGGCTATGTG AGTGCCAGTT TCGTTGGACA TTATCTGAGT ATGGTCAGCC CCGAGGCTTG GCGTTGGTTG TTATCTTCTG CCGCCCTGCC CGCTTTACTT ATTCTCCTTG TACGGATTGG TACGCCGGAG TCACCGCGCT GGCTAATGGG AAAAGGTCGT GAGGACGATG CCATGGCCAT TGTGCATAAG TACTTTGGCC CGAACGTAAC GTTGATTGAT GAGGAACCCG CGACTTCCAC CCGCCGTTTT CTGTCTTTAT TTGGCCGTAA ATACTGGCGA CGTACCGCTT TTAATAGCTT ATTTTTTGTT TGTCTGGTGA TCCCCTACTT CGCGATCTAT ACCTTTTTAC CCTCGATTCT TAACGTGATG GCGTTGAGCC AGAATTTTGC TACCGACTTG TTATTGAACG GCTTGCTCGT GGTGGGTGCT TTAGTCGGTA TTGTCCTGAC TGCATTCTGC TCGCGCCGTA GCTTCCTGAT CTCTTCCTTT ATTTTCCTGG CTACCTGCCT ACTCTTGCTG AGCATACTGC CTTCCAATCA AACATTTTGG CTGATTGCAC TCTTCGCGGC TTTTACTCTT GTGATGTCTG CCGTCAGTAA CCTAGTCGGT GTGTTCCCGG CCGAGAGTTT CCCGACCGAA GTACGCTCAA TGGGGGTGGG ATTTGCGACT TCCATGAGTC GCTTGGGATC AGCTATTGGT ACCAGCCTGC TGCCATTAGC CATTGTCAAT TATGGAATGC CCGTAACCAC CACCCTCTTG GCATTCGTTT TAATTATTGG AGCCATCGTT TCTATCGCTT GGGCACCGGA AACGAAAGGA CTCACCCTCG TTGATGCCTC ACAATCAGCA ACCACACCAC GCCCACCGTC CAGCATTATT CCAAACTGA
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Protein sequence | MQTLPSEKIR MDDVPLNRFH IRIAGLTFGA HFIDGYILGL IGFALIQLKP IMALTPLWEG LLGSAALIGL FLGSLILGWI SDYIGRQKIF SFSFVIITLA SALQFFASTP EQLFILRVIV GIGIGGDYTV GHTLLAEFSP RKHRGVLLGA FSVIWTFGYV SASFVGHYLS MVSPEAWRWL LSSAALPALL ILLVRIGTPE SPRWLMGKGR EDDAMAIVHK YFGPNVTLID EEPATSTRRF LSLFGRKYWR RTAFNSLFFV CLVIPYFAIY TFLPSILNVM ALSQNFATDL LLNGLLVVGA LVGIVLTAFC SRRSFLISSF IFLATCLLLL SILPSNQTFW LIALFAAFTL VMSAVSNLVG VFPAESFPTE VRSMGVGFAT SMSRLGSAIG TSLLPLAIVN YGMPVTTTLL AFVLIIGAIV SIAWAPETKG LTLVDASQSA TTPRPPSSII PN
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