| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1707 |
|---|
| Symbol | |
|---|
| ID | 5800178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1762854 |
|---|
| End bp | 1763468 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641339647 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001606202 |
|---|
| Protein GI | 162419034 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0182424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000162083 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TAATCATCGA CGAATGCTTT TATACTCGTT CTGGAGTCAA TACCTATTTG
AATAGTGTCT CATCTATAAA ATTAATGGAT GTCCCTACCG TTGAAGAGGC AACTTTAGCT
ATTCAAGAAT TTCAGCCGGA TATAATTATT GTTAATTTAA CTCAATATTG TCGCTATGGT
GGTCATTGTC CATTGTTAGC GCAATTTATT CATTACTGTA CCCGAGCTAA AGTTTATATC
TATTTAGATG CTTCTTACCC TTTTAGTGAA ACGCCTATTC CTCTGACAGA ATCCGTATCA
ATGCCTATTC CTCTGACAGA ATCCGTATCA ATACTGGCTA AGAAACATCT ACCCAATTTA
CTCCGCAGGT TACCTGGTTT CTCTCTTGAG AGGCTAGGCA TTCAGCCAAA CCAACAGGCT
TCCCTGTTCA GTCCACAAGA GCACAAAGTG ATGTGTTACT GGATGACAGA GATGCCTAAC
TATCGCATTG CCAGAAAGCT AAATATCAGC GGCAGTACGG TTTACTCACA TAAACGTCAT
ATCACCGAGA AAATAAAAGT CAGGAATAGA TTGGAATTGT GTTTCATTTA TAATGTGTTT
AAGTATTTGT ACTAG
|
|---|
| Protein sequence | MKILIIDECF YTRSGVNTYL NSVSSIKLMD VPTVEEATLA IQEFQPDIII VNLTQYCRYG
GHCPLLAQFI HYCTRAKVYI YLDASYPFSE TPIPLTESVS MPIPLTESVS ILAKKHLPNL
LRRLPGFSLE RLGIQPNQQA SLFSPQEHKV MCYWMTEMPN YRIARKLNIS GSTVYSHKRH
ITEKIKVRNR LELCFIYNVF KYLY
|
|---|
| |