Gene YpAngola_A1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1707 
Symbol 
ID5800178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1762854 
End bp1763468 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content38% 
IMG OID641339647 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001606202 
Protein GI162419034 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0182424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000162083 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAT TAATCATCGA CGAATGCTTT TATACTCGTT CTGGAGTCAA TACCTATTTG 
AATAGTGTCT CATCTATAAA ATTAATGGAT GTCCCTACCG TTGAAGAGGC AACTTTAGCT
ATTCAAGAAT TTCAGCCGGA TATAATTATT GTTAATTTAA CTCAATATTG TCGCTATGGT
GGTCATTGTC CATTGTTAGC GCAATTTATT CATTACTGTA CCCGAGCTAA AGTTTATATC
TATTTAGATG CTTCTTACCC TTTTAGTGAA ACGCCTATTC CTCTGACAGA ATCCGTATCA
ATGCCTATTC CTCTGACAGA ATCCGTATCA ATACTGGCTA AGAAACATCT ACCCAATTTA
CTCCGCAGGT TACCTGGTTT CTCTCTTGAG AGGCTAGGCA TTCAGCCAAA CCAACAGGCT
TCCCTGTTCA GTCCACAAGA GCACAAAGTG ATGTGTTACT GGATGACAGA GATGCCTAAC
TATCGCATTG CCAGAAAGCT AAATATCAGC GGCAGTACGG TTTACTCACA TAAACGTCAT
ATCACCGAGA AAATAAAAGT CAGGAATAGA TTGGAATTGT GTTTCATTTA TAATGTGTTT
AAGTATTTGT ACTAG
 
Protein sequence
MKILIIDECF YTRSGVNTYL NSVSSIKLMD VPTVEEATLA IQEFQPDIII VNLTQYCRYG 
GHCPLLAQFI HYCTRAKVYI YLDASYPFSE TPIPLTESVS MPIPLTESVS ILAKKHLPNL
LRRLPGFSLE RLGIQPNQQA SLFSPQEHKV MCYWMTEMPN YRIARKLNIS GSTVYSHKRH
ITEKIKVRNR LELCFIYNVF KYLY