Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1685 |
Symbol | |
ID | 5800156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1737067 |
End bp | 1738059 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641339625 |
Product | TRAP transporter solute receptor DctP family protein |
Protein accession | YP_001606181 |
Protein GI | 162418921 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00806024 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0274262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTGC CAACGTCTTT CCCTACATTA TGTTTAACCG CCTCGGCGTT GTTACTGAGC CAAGTGCTAT TTAGCCAATC CGCAACTGCC CAACAAATTA AAGCAGCCGA TGTTCATCCT AAAGATTATC CCAATGTCGT GGCGATGAAA GATATGGGCG AAAAACTAAA AGTCGCGACT GATGGCCGTC TGGAGATGAA AACATTTCCT GGTGGAGTAT TAGGTGATGA GAAGCAAATG ATAGAACAGG CGCAAATGGG GGCAATCGAT ATTATTCGTG TATCCATGAC ACCCGTTGCC TCTATTTTAC CGGAGATTAA TGTCTTTACC CTCCCCTATA TCTTCCGCGA CGAAGATCAT TTACATAAGG TCCTTGATGG TAAAATTGGT CAGGAAATAG GCGGTAAAAT CACCGATAAC AAAAATTCAA AATTGGTGTT CTTAGGTTGG ATGGATGGCG GTACCCGTCA CCTGATTACT AAACAACCAG TGATTAAACC GGAAGATCTC AGCGGGATGA AAATCCGTGT TCAAGGCAGC CCGATTGCGT TAGCAACGCT AAAATCAATG GGGGCCAATG CCCTGAGTAT GGGCGTCAGT GAAGTGTTCA GCGGTATGCA AACCGGGGTC ATTGATGGCA CCGAAAATAA CCAGCCTACA TTTGTAGCCC ATAATTACCT GCCTGTTGTC AAAAATTATA CCCTGAGCGG CCATTTCATT ATTCCCGAAG TATTCCTGTA TTCGAAAGCC AAGTGGGACA AATTATCTGC CGAAGATCAG CAAACCATTC TTAAATTAGC AAAAGAAGCA CAAGCTGAGC AACGCGTATT ATGGACAGCC TATGAGCAAC AAGCTCATGA GAAAATGAAG GCCGGCGGTG TGCAGTATCA TGAGATTGAT CGTGATTATT ATTATAAAGC CACTCAGCCC GTACGCGATG AGTTCGGCAA AGGTCATGAG GACTTGATTA AACAGATTGG TGACGTCCAA TAA
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Protein sequence | MRLPTSFPTL CLTASALLLS QVLFSQSATA QQIKAADVHP KDYPNVVAMK DMGEKLKVAT DGRLEMKTFP GGVLGDEKQM IEQAQMGAID IIRVSMTPVA SILPEINVFT LPYIFRDEDH LHKVLDGKIG QEIGGKITDN KNSKLVFLGW MDGGTRHLIT KQPVIKPEDL SGMKIRVQGS PIALATLKSM GANALSMGVS EVFSGMQTGV IDGTENNQPT FVAHNYLPVV KNYTLSGHFI IPEVFLYSKA KWDKLSAEDQ QTILKLAKEA QAEQRVLWTA YEQQAHEKMK AGGVQYHEID RDYYYKATQP VRDEFGKGHE DLIKQIGDVQ
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