Gene YpAngola_A1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1665 
SymbolaroP1 
ID5800136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1720039 
End bp1721412 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content47% 
IMG OID641339608 
Productaromatic amino acid transporter 
Protein accessionYP_001606165 
Protein GI162418380 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000114878 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.317193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC AGTTACAGAA CTCATCGTTA AAACGCGGTT TAAAAAATAG ACATATTCAA 
CTAATAGCTT TGGGTGGCGC AATCGGAACC GGGTTATTTC TCGGGATTGC CCAAACCATC
AATATGGCCG GCCCCTCAGT AATATTGGGG TATGCAATAG GCGGGTTTAT TGCTTTTCTG
ATTATGCGTC AATTAGGTGA AATGGTCGTC GAAGAGCCTG TTGCTGGCTC ATTCAGCCAC
TTTGCCTATA AGTATTGGGG CGATTTTGCT GGTTTTCTAT CGGGCTGGAA CTACTGGGCC
ATGTTTATTC TGGTCGGTAT GGCTGAATTG ACTGCGGTAG GCATATATAT TCAGTATTGG
TGGCCTGAGA TACCGACATG GGTTTCAGCA GCAGTATTCT TTATCATAAT CAACGCTATC
AACTTAGTTA ACGTACGTCT GTATGGCGAA ACGGAGTTTT GGTTTGCCAT CATTAAAGTG
GCTGCAATTA TCGGTATGAT TGTGTTCGGT GCTTATCTAC TGGCATCGGG ATCTGGTGGG
CCAGCCGCCT CGGTGACAAA TCTCTGGGCG CAGGGGGGTT TTATGCCCCA TGGCTTTCGT
GGTTTGATCA TGGCAATGGC GGTTATTATG TTCTCTTTTG GCGGTCTGGA GATGGTAGGG
ATTACTGCAG CAGAAGCCGA AGATCCACGG AACAGTATTC CTAAAGCGAC TAATCAGGTC
GTTTATCGCA TTCTTATTTT TTATATTGGC TCACTGACGG TGCTTCTGTC TCTTTTCCCG
TGGAACAATG TCGTCGAAGG GGGAAGTCCT TTCGTGATGA TTTTCGATGC GTTAGATAGC
CCTTGGGTGG CAACAGCATT GAATGTGGTT GTCCTGACCG CCGCCCTGTC GGTGTATAAC
AGTGGTGTGT ATTGTAACAG TCGTATGCTT TTTGGGCTGG CATCACAGGG GAATGCGCCT
AAGTTGTTGA CCAAGTTAAA TAAGCGTGGT GTCCCCATCC GTTCAATTGC ACTTTCAGCA
TTAGCGACTT CAGCTGGCGT GGTGATTAAC TATATTATGC CCGGCAAAGC CTTTGAATTA
CTTATGGCGT TGGTGGTTTC AACACTGGTA ATCAACTGGG TGATGATTTG CCTGGCGCAT
CTGAAGTTTC GCAAGGCTAA AGTTAAAGAG GGCGTTGTGC CTCGCTTCAA AGCACTCTGG
TACCCCTACG GCAATTATCT GTGCCTGGTC TTCCTCGCAT TAATTCTCGT CATTATGTAT
CTCACCGAAG GGATTCGGAT CTCTGTGTTG ATGATGCCAG TATGGATAGC GTTACTTTGG
TGTGGTTTTG TACTTACTCG GCGTAAGTGT CCAAAAACGG TGACTAGCCT CTAA
 
Protein sequence
MEQQLQNSSL KRGLKNRHIQ LIALGGAIGT GLFLGIAQTI NMAGPSVILG YAIGGFIAFL 
IMRQLGEMVV EEPVAGSFSH FAYKYWGDFA GFLSGWNYWA MFILVGMAEL TAVGIYIQYW
WPEIPTWVSA AVFFIIINAI NLVNVRLYGE TEFWFAIIKV AAIIGMIVFG AYLLASGSGG
PAASVTNLWA QGGFMPHGFR GLIMAMAVIM FSFGGLEMVG ITAAEAEDPR NSIPKATNQV
VYRILIFYIG SLTVLLSLFP WNNVVEGGSP FVMIFDALDS PWVATALNVV VLTAALSVYN
SGVYCNSRML FGLASQGNAP KLLTKLNKRG VPIRSIALSA LATSAGVVIN YIMPGKAFEL
LMALVVSTLV INWVMICLAH LKFRKAKVKE GVVPRFKALW YPYGNYLCLV FLALILVIMY
LTEGIRISVL MMPVWIALLW CGFVLTRRKC PKTVTSL