Gene YpAngola_A1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1649 
SymbolhpaR 
ID5800120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1702874 
End bp1703341 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content45% 
IMG OID641339593 
Producthomoprotocatechuate degradative operon repressor 
Protein accessionYP_001606150 
Protein GI162419012 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID[TIGR02337] homoprotocatechuate degradation operon regulator, HpaR 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.976372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAT CACTGACCAT CGCATTATTG CAGGCTCGTG AAGCCGCTAT GGCTTTTTTT 
CGGCCTATCT TGAAAGCCAA TCATCTGACT GAGCAGCAAT GGCGGATCAT TCGAGTGCTC
GCGGATAATC GCTCAATTGA TTTTCATGGG CTGGCCCGCC AAACCTGTAT TTTACGTCCA
AGCCTAACGG GGATTTTGAC GCGAATGGAG CGTAACAATT TGATTTTTCG CCTCAAACCC
GTCAACGATC AGCGCAAACT TTATGTCTCC TTAACTCAGG AGGGACAAAA TTTGTATGAC
AACGCTCGGC CACAGGTTGA AGAAGGTTAC AGGCTAATTG AGGCAGCATT TTCACCAGAT
AAAATGGCGC AACTCTCTTT ACTGCTGGAT GAATTCATTA CCGTGGGTAA TAAACATCGG
CAAGCGAATG AGATGTCAGA AAATGAGATG TTAGAAGATG AAGAGTGA
 
Protein sequence
MHESLTIALL QAREAAMAFF RPILKANHLT EQQWRIIRVL ADNRSIDFHG LARQTCILRP 
SLTGILTRME RNNLIFRLKP VNDQRKLYVS LTQEGQNLYD NARPQVEEGY RLIEAAFSPD
KMAQLSLLLD EFITVGNKHR QANEMSENEM LEDEE