Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1642 |
Symbol | hpaI |
ID | 5800113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1696690 |
End bp | 1697496 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641339588 |
Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
Protein accession | YP_001606145 |
Protein GI | 162420136 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCAT TAACAAATAA ATTTAAACAG GCACTGAAAG CAAAAAAACC ACAAATTGGC TTATGGCTAG GTTTGTGTAG CAATTACAGT GCTGAAATCC TGGCCGGTGC GGGGTTTGAC TGGTTGTTGA TCGACGATGA ACATGCCCCG AATGATGTAC AACGGATCTT AGGGCAATTA CAGACGATCG CGTCTTATCC GAGCCAGCCC GTGGTTCGTC CGGCGTGGAA TGACCCGGTA ATGATAAAAA AATTGCTGGA TATTGGCGCA CAAACCTTAT TGCTCCCAAT GATTCAAAAC GCCGCACAAG CGCGCGCTGC GATCAGTGCG ACCCGCTATC CTCCGCAGGG GATTCGCGGC GTCGGAAGCG CGCTGGCCCG AGCTTCCCGT TGGAATAGAA TCGCAGATTA TGTGCAGCAA GCTGACGAAC AGATATGCGT ATTGCTCCAA ATAGAAACAC GCGAAGCACT GCGCAATCTA CCCGAGATTT TGGCGGTTGA TGGTGTCGAT GGTGTGTTTA TCGGCCCGGC CGATCTCGCT TCTGATATGG GTTTTGCGGG TAATCCACAC CATCCCGAGG TCCGTCAAGC CATCGATAGC GCAGTGATGA AAATTAAGAC TGCCGATAAA GCGGCCGGGA TCTTGATGAC CACGCCAGAG GTGGCTGAGT ATTATCTGAA ACTGGGGGCA CTATTTGTGG CTGTAGGTGT AGATACGACG CTATTAGCAC GCACAGCCGA GGCACTGGCA GCCCGCTTCG GTGTGGGTAA TCATCATCCA CCGCTTGCAC CATCGGGTGG ATATTAA
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Protein sequence | MFPLTNKFKQ ALKAKKPQIG LWLGLCSNYS AEILAGAGFD WLLIDDEHAP NDVQRILGQL QTIASYPSQP VVRPAWNDPV MIKKLLDIGA QTLLLPMIQN AAQARAAISA TRYPPQGIRG VGSALARASR WNRIADYVQQ ADEQICVLLQ IETREALRNL PEILAVDGVD GVFIGPADLA SDMGFAGNPH HPEVRQAIDS AVMKIKTADK AAGILMTTPE VAEYYLKLGA LFVAVGVDTT LLARTAEALA ARFGVGNHHP PLAPSGGY
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