Gene YpAngola_A1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1642 
SymbolhpaI 
ID5800113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1696690 
End bp1697496 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content51% 
IMG OID641339588 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_001606145 
Protein GI162420136 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAT TAACAAATAA ATTTAAACAG GCACTGAAAG CAAAAAAACC ACAAATTGGC 
TTATGGCTAG GTTTGTGTAG CAATTACAGT GCTGAAATCC TGGCCGGTGC GGGGTTTGAC
TGGTTGTTGA TCGACGATGA ACATGCCCCG AATGATGTAC AACGGATCTT AGGGCAATTA
CAGACGATCG CGTCTTATCC GAGCCAGCCC GTGGTTCGTC CGGCGTGGAA TGACCCGGTA
ATGATAAAAA AATTGCTGGA TATTGGCGCA CAAACCTTAT TGCTCCCAAT GATTCAAAAC
GCCGCACAAG CGCGCGCTGC GATCAGTGCG ACCCGCTATC CTCCGCAGGG GATTCGCGGC
GTCGGAAGCG CGCTGGCCCG AGCTTCCCGT TGGAATAGAA TCGCAGATTA TGTGCAGCAA
GCTGACGAAC AGATATGCGT ATTGCTCCAA ATAGAAACAC GCGAAGCACT GCGCAATCTA
CCCGAGATTT TGGCGGTTGA TGGTGTCGAT GGTGTGTTTA TCGGCCCGGC CGATCTCGCT
TCTGATATGG GTTTTGCGGG TAATCCACAC CATCCCGAGG TCCGTCAAGC CATCGATAGC
GCAGTGATGA AAATTAAGAC TGCCGATAAA GCGGCCGGGA TCTTGATGAC CACGCCAGAG
GTGGCTGAGT ATTATCTGAA ACTGGGGGCA CTATTTGTGG CTGTAGGTGT AGATACGACG
CTATTAGCAC GCACAGCCGA GGCACTGGCA GCCCGCTTCG GTGTGGGTAA TCATCATCCA
CCGCTTGCAC CATCGGGTGG ATATTAA
 
Protein sequence
MFPLTNKFKQ ALKAKKPQIG LWLGLCSNYS AEILAGAGFD WLLIDDEHAP NDVQRILGQL 
QTIASYPSQP VVRPAWNDPV MIKKLLDIGA QTLLLPMIQN AAQARAAISA TRYPPQGIRG
VGSALARASR WNRIADYVQQ ADEQICVLLQ IETREALRNL PEILAVDGVD GVFIGPADLA
SDMGFAGNPH HPEVRQAIDS AVMKIKTADK AAGILMTTPE VAEYYLKLGA LFVAVGVDTT
LLARTAEALA ARFGVGNHHP PLAPSGGY