Gene YpAngola_A1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1633 
SymboldbpA 
ID5800104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1685401 
End bp1686783 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content50% 
IMG OID641339579 
ProductATP-dependent RNA helicase DbpA 
Protein accessionYP_001606136 
Protein GI162421745 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAA CTTCCTTTTC TTCCCTGACA CTGCCTGCTG AGCAGTTGTC CAATCTTAAT 
GAACTTGGCT ATACCGAGAT GACCCCGGTA CAAGCTGCGG TGTTACCCGC AATCCTCAAC
GGGCAGGATG TCCGGGCGAA GGCCAAAACC GGCAGCGGTA AAACAGCCGC ATTTGGCATT
GGTTTGCTGG ACAAAATAGC GGTAGGGGAA TTTGTTACCC AAGCGCTGGT ATTGTGCCCA
ACCCGAGAAT TAGCAGACCA GGTCAGTAAA GAGCTGCGCC GTTTAGCACG GTTTACACAA
AATATTAAAA TTCTGACCCT GTGTGGCGGC CAACCGATGG GCCACCAATT AGATTCTCTG
GTCCATGCAC CGCACATTGT CGTGGGTACG CCAGGGCGTA TTCAGGAACA TCTGCGCAAG
AAAACGCTGG TACTTGATGA GTTGAAAACG CTGGTGTTGG ATGAAGCTGA TCGCATGTTG
GATATGGGTT TTTCCGATGC CATTGATGAC GTGATTGCGT ATACCCCTCC ACAGCGGCAA
ACCTTGTTGT TCTCTGCCAC CTACCCATCA GGTATTGAGC AGATCAGTGC ACGAGTTCAG
CGCCAACCAT TGAATGTTGA AGTGGGTGAT ACCGATGAAG AGCCCGCTAT TGAACAGGTG
TTTTTTGAAA CGACTCGTGA GAAACGGCTG CCACTGCTGA TCTCAGTTCT GAGCCATTAC
CAGCCGGCCT CTTGTGTGGT GTTCTGTAAC ACCAAAAAAG ATTGTCAGAG CGTTTATGAG
TCACTGGAAT CACGTGGTAT CAGTGTCTTG GCTTTGCACG GGGATTTAGA ACAGCGTGAT
CGTGATCAGG TTCTGGTGCG TTTTGCCAAT CGTAGCTGCC GTGTGTTGGT GGCGACCGAT
GTTGCTGCTC GTGGTTTAGA TATCAAGGAT CTGGAGCTGG TCATTAACTT TGAATTGGCG
TTTGATCCCG AAATTCACAT ACACCGCATT GGCCGTACCG GGCGCGCAGG GATGAGCGGC
CTGGCCGTTA GCCTATGTAC GCCACAGGAA ATGGTACGTG CCCATACCAT CGAAGATTAT
CTGCAAATAA AATTGAAATG GACACCTGCG GAACAGGTTA GCCGTAGCAC CAACATCATG
CTGGAACCAG AAATGGTGAC GTTATGCATT GACGGGGGGC GCAAAGCTAA AATTCGCCCT
GGTGACATTC TCGGGGCATT AACCGGTGAT GCAGGGTTAA CCGCCGCAGA TGTGGGTAAG
ATTGATATGT TCCCGGTTCA TGCCTATGTG GCTATCCGTA AAGCCAGTGC CAAGCGTGCG
TTGCAACAAT TGCAGCAAGG CAAAATCAAA GGTAAAAACT GTAAAGCCCG TCTATTAAAA
TAA
 
Protein sequence
MSTTSFSSLT LPAEQLSNLN ELGYTEMTPV QAAVLPAILN GQDVRAKAKT GSGKTAAFGI 
GLLDKIAVGE FVTQALVLCP TRELADQVSK ELRRLARFTQ NIKILTLCGG QPMGHQLDSL
VHAPHIVVGT PGRIQEHLRK KTLVLDELKT LVLDEADRML DMGFSDAIDD VIAYTPPQRQ
TLLFSATYPS GIEQISARVQ RQPLNVEVGD TDEEPAIEQV FFETTREKRL PLLISVLSHY
QPASCVVFCN TKKDCQSVYE SLESRGISVL ALHGDLEQRD RDQVLVRFAN RSCRVLVATD
VAARGLDIKD LELVINFELA FDPEIHIHRI GRTGRAGMSG LAVSLCTPQE MVRAHTIEDY
LQIKLKWTPA EQVSRSTNIM LEPEMVTLCI DGGRKAKIRP GDILGALTGD AGLTAADVGK
IDMFPVHAYV AIRKASAKRA LQQLQQGKIK GKNCKARLLK