Gene YpAngola_A1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1619 
Symbol 
ID5800088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1673364 
End bp1674038 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content36% 
IMG OID641339563 
Producthypothetical protein 
Protein accessionYP_001606122 
Protein GI162421726 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3306] Glycosyltransferase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.798973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA ATTGGAATTG GTCTTTAGTA GACAAAGTTG TTTACATTAA TTTGAAGGAA 
CGTACGGATA GAAATGAGCA CATCAAAAAA GAACTGGAAA AAGTGTGCTT TCCACCTGAA
AAAATAATCC GCTTTGAGGC AATAAGAGCA GGGTCAGGTT TTATCGGTTG CGCAAAATCA
CATCTTGCAG TATTAAAAAT GGCGCAAGAG AATAATTGGA GAAATATTTT GATACTTGAA
GACGATATGG TCTTCGAAGA TGATGATGAA ACAATTATCC GGACAAACAA TTTTCTCTCT
AAACTGAATA ATATTCATTG GGATGCTGCA TTTTTATCCG CCAGCTATTA TATCGTTAAC
GCTATTGATG ATAATTTTTT TAAAGTCAAT TTCGCCTATC TGGCTAACAG CTATCTGGTC
AATAATCATT ATTATGAAAA ATTAATCAAT AACTACACGG AGTCTGTTCA GCGATTAACA
AATGGCGAGT CATCGTCAGA GTACGGGTTG GATTCTAACT GGTTGAAAAT AATGAAAATA
GACAACTGGT ACGGAATTTA CCCGGTTATT GGCTATCAGC GTACCGATAT CAGTGATATT
GAATATAAAG AGATCGATCG CACACACCAG TTCACCCGAA CATTCGATAA GATGAAAGCA
TACGGTTCAA AATAA
 
Protein sequence
MNENWNWSLV DKVVYINLKE RTDRNEHIKK ELEKVCFPPE KIIRFEAIRA GSGFIGCAKS 
HLAVLKMAQE NNWRNILILE DDMVFEDDDE TIIRTNNFLS KLNNIHWDAA FLSASYYIVN
AIDDNFFKVN FAYLANSYLV NNHYYEKLIN NYTESVQRLT NGESSSEYGL DSNWLKIMKI
DNWYGIYPVI GYQRTDISDI EYKEIDRTHQ FTRTFDKMKA YGSK