| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1599 |
|---|
| Symbol | cspD |
|---|
| ID | 5800068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1649113 |
|---|
| End bp | 1649376 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641339545 |
|---|
| Product | cold shock domain-containing protein CspD |
|---|
| Protein accession | YP_001606104 |
|---|
| Protein GI | 162421201 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGG GTACTGTTAA ATGGTTCAAC AACGCCAAAG GTTTTGGCTT TATTTGCCCT
GAGGGCGGTG GCGAAGACAT TTTCGCTCAC TATTCAACTA TCCAGATGGA TGGTTACCGA
ACATTAAAAG CCGGCCAAAT AGTTAACTTT GATGTTCATG AAGGCCCCAA AGGGAACCAT
GCTAGCCTGA TTGTTCCGCT AGAGTTAAAT AGTGTACCAC CGTTAGACGG TGTATCACCG
CCGGAACTCG CTATACTGGC CTGA
|
|---|
| Protein sequence | METGTVKWFN NAKGFGFICP EGGGEDIFAH YSTIQMDGYR TLKAGQIVNF DVHEGPKGNH
ASLIVPLELN SVPPLDGVSP PELAILA
|
|---|
| |