| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1578 |
|---|
| Symbol | |
|---|
| ID | 5800047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1627124 |
|---|
| End bp | 1627969 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641339525 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_001606084 |
|---|
| Protein GI | 162421659 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG GCGCGTTATT GGCTATTCTC GCCTCCCTGA TTTTCAGCGT GATGAATGTG
TTAGTCAAAA CCATCGCTGA TGAAATTCCT ACCGGTGAGA TCGTATTCTT CCGCAGTAGC
ATTGGTTGCT TGTTGATTGG GTTACTGATG TATCAGCGTG GGATAGCGTT CAGCCGTGAA
GATCGCCCAT TGTTGGTACT CCGGGGGACG ATGGGCGCAC TGTATCTGAT TTGCTATTTT
TACAGTATTG CTCACCTGAC ATTGGCAGAT GCCAGCATGT TGGCCTATCT GTCACCGTTT
TTCTCGATTG TGCTGTCATT ATTAGTGTTG CGCGAACGGG TGAATGCCAC CATGGCTTTC
TGGTTGGTGA TGGTGATTAT TGGCGCGATT ATCTTGATCC GCCCGTGGAA TTTTTCCACC
TATACGTTGG CGTCTCTGGT GGGGGTGATG AGTGCGGTAT TTGCGGCTAT TGCTTATTTG
TCGGTGAATA AGCTCACGAA GCGCCATCAC AATTATGAAA TCGTCTTCTA CTTTTTGTTT
ATCGCGACGC TGATCTCTAT CCCACTGATG TGGCATAACT TTGTTTGGCC GAGTGGGTAT
CAGTTCGGCA TTCTCATCGC CATTGCTCTT GTCTCATTGC TAGGTCAGGT GGTTTTAACG
CAGGCTTTCT CTTCGGACAA CCTGATCGTG GTGTCGGTGG TGCGCTATAT CGGCATTGTC
TTCAATATTA CCTGGGGCTG GCTATTTTGG GATGAGGTGC CATTGATGTT GTCGTTGATG
GGGGGCGGGT TGGTGGTGGT ATCGTGCATT CAGTTGGGGT TACGCAGTAA AAAGAAGGCG
GCCTGA
|
|---|
| Protein sequence | MNQGALLAIL ASLIFSVMNV LVKTIADEIP TGEIVFFRSS IGCLLIGLLM YQRGIAFSRE
DRPLLVLRGT MGALYLICYF YSIAHLTLAD ASMLAYLSPF FSIVLSLLVL RERVNATMAF
WLVMVIIGAI ILIRPWNFST YTLASLVGVM SAVFAAIAYL SVNKLTKRHH NYEIVFYFLF
IATLISIPLM WHNFVWPSGY QFGILIAIAL VSLLGQVVLT QAFSSDNLIV VSVVRYIGIV
FNITWGWLFW DEVPLMLSLM GGGLVVVSCI QLGLRSKKKA A
|
|---|
| |