Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1569 |
Symbol | artJ |
ID | 5800038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1619161 |
End bp | 1619892 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641339518 |
Product | arginine ABC transporter periplasmic substrate-binding protein ArtJ |
Protein accession | YP_001606077 |
Protein GI | 162419115 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TACTATTGGC AACGTTATTA AGTGGCATGG CTTTCAGCGC TACCGCCGCA GAGACCCTCC GTTTTGCAGC CTCAGCCACC TACCCGCCAT TTGAATCTAT GGATGCCAAT AACGAAATCG TTGGCTTTGA TATGGATCTG GCAAAAGCAC TGTGTAAACA AATGGAAGCC AACTGTACTT TCACTAATCA GGCTTTTGAT AGCCTGATCC CAGCGCTTAA ATTCAAACGT TATGATGCCG TTATCTCTGG TATGGATATC ACGCCAGAAC GCAGCAAGCA GGTGGCATTC ACTCAGCCTT ACTACGCTAA CTCCGCGATT GTTATCGCCC CGAAAGGTAA ATTCAGCACT TTTGCTGACC TGAAAGGCAA AAAGATTGGG ATGGAGAATG GCACTACCCA TCAGAAATAT TTACAGGATA AACATCCTGA AATTCAGACC GTGTCTTATG ACAGCTACCA GAATGCCATC ATTGATCTGA AAAATGGCCG TATTGATGGT GTGTTTGGTG ATACTGCGGT AGTGAATGAA TGGCTGAAAA CCAATCCTAA TTTAGCCTCT GTCGGCGAGC ATGTGACCGA CCCACAATAT TTCGGCACCG GTTTAGGTAT TGCTGTGCGC CCGGATAACA TCGCCCTACT GACAAAATTG AATAAAGCCA TTGATGCGGT GAAAGCTGAT GGTACTTATC AAGCGATCAA TGATAAGTGG TTCCCTCAAT AA
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Protein sequence | MKKLLLATLL SGMAFSATAA ETLRFAASAT YPPFESMDAN NEIVGFDMDL AKALCKQMEA NCTFTNQAFD SLIPALKFKR YDAVISGMDI TPERSKQVAF TQPYYANSAI VIAPKGKFST FADLKGKKIG MENGTTHQKY LQDKHPEIQT VSYDSYQNAI IDLKNGRIDG VFGDTAVVNE WLKTNPNLAS VGEHVTDPQY FGTGLGIAVR PDNIALLTKL NKAIDAVKAD GTYQAINDKW FPQ
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