Gene YpAngola_A1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1569 
SymbolartJ 
ID5800038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1619161 
End bp1619892 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content45% 
IMG OID641339518 
Productarginine ABC transporter periplasmic substrate-binding protein ArtJ 
Protein accessionYP_001606077 
Protein GI162419115 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TACTATTGGC AACGTTATTA AGTGGCATGG CTTTCAGCGC TACCGCCGCA 
GAGACCCTCC GTTTTGCAGC CTCAGCCACC TACCCGCCAT TTGAATCTAT GGATGCCAAT
AACGAAATCG TTGGCTTTGA TATGGATCTG GCAAAAGCAC TGTGTAAACA AATGGAAGCC
AACTGTACTT TCACTAATCA GGCTTTTGAT AGCCTGATCC CAGCGCTTAA ATTCAAACGT
TATGATGCCG TTATCTCTGG TATGGATATC ACGCCAGAAC GCAGCAAGCA GGTGGCATTC
ACTCAGCCTT ACTACGCTAA CTCCGCGATT GTTATCGCCC CGAAAGGTAA ATTCAGCACT
TTTGCTGACC TGAAAGGCAA AAAGATTGGG ATGGAGAATG GCACTACCCA TCAGAAATAT
TTACAGGATA AACATCCTGA AATTCAGACC GTGTCTTATG ACAGCTACCA GAATGCCATC
ATTGATCTGA AAAATGGCCG TATTGATGGT GTGTTTGGTG ATACTGCGGT AGTGAATGAA
TGGCTGAAAA CCAATCCTAA TTTAGCCTCT GTCGGCGAGC ATGTGACCGA CCCACAATAT
TTCGGCACCG GTTTAGGTAT TGCTGTGCGC CCGGATAACA TCGCCCTACT GACAAAATTG
AATAAAGCCA TTGATGCGGT GAAAGCTGAT GGTACTTATC AAGCGATCAA TGATAAGTGG
TTCCCTCAAT AA
 
Protein sequence
MKKLLLATLL SGMAFSATAA ETLRFAASAT YPPFESMDAN NEIVGFDMDL AKALCKQMEA 
NCTFTNQAFD SLIPALKFKR YDAVISGMDI TPERSKQVAF TQPYYANSAI VIAPKGKFST
FADLKGKKIG MENGTTHQKY LQDKHPEIQT VSYDSYQNAI IDLKNGRIDG VFGDTAVVNE
WLKTNPNLAS VGEHVTDPQY FGTGLGIAVR PDNIALLTKL NKAIDAVKAD GTYQAINDKW
FPQ