Gene YpAngola_A1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1546 
Symbol 
ID5800014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1597459 
End bp1598283 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID641339494 
ProductNLPA family lipoprotein 
Protein accessionYP_001606054 
Protein GI162420887 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA CACCTGTTTC TGGCTTGGTT CGTACAGCAT TATTCGCAGC ATTAGCTTCT 
GCTTTCAGCT TATCAGCCCA GGCGGCTGAG GCACTGCGGG TAGCGGCTGA CCCCGTGCCC
CATGCTGAAA TCCTGCAATT CGTACAAAAG CTGGACCCTT CACTGAATTT GACCATTATC
GAAATCCCCA ACGGGGTGAA CTCCAACGAA TTGCTGGCCC ATGGCGATGT TGATGCTAAT
TATTTTCAGC ATCTCCCATA TTTACACTCA CAAGAGCAGG CACTAGGGCA AAAATTTGTG
GTTGCAGCCA CCGTCCATAT TGAGCCACTT GGCATTTATT CACACAAATA TAAAAACGTT
GCCGAAGTGC CGGATAAGGG CAGCGTCGCG GTACCGAATA ACGTCACTAA CCTCAGCCGT
GCACTCTATT TACTGCAAGA GCAGGGACTG ATCACCTTAA AACCGGGTTT TACTGACCCA
GCCAAACAGC AGGCAACACC GAAAGATATC GCGGAGAATC CCAAGCACCT GAAAATCTTG
GAAATCGAAT CACCACAAAT CCCTCGCTCA TTGGATGATG TTGATTTAGC CGTCATTAAT
GGCAACTATG CTCTGGAGGC AGGGTTAAAT CCGGCAACCG ATGCATTGGG GTTGGAGAAA
GCTGAAGGTA ATCCTTACGC CAATATTTTG GTGACCACCC CTACGTTGGA AAATGATCCG
CGAATCAAGC AACTGGCAAA AGATTTGCAA TTGCAGGAAG TGGCTAAATT TATTACTGAA
AAATATGCTG GCTCGGTTAT CCCGGTGGCA GGAACTCAAC CATGA
 
Protein sequence
MTKTPVSGLV RTALFAALAS AFSLSAQAAE ALRVAADPVP HAEILQFVQK LDPSLNLTII 
EIPNGVNSNE LLAHGDVDAN YFQHLPYLHS QEQALGQKFV VAATVHIEPL GIYSHKYKNV
AEVPDKGSVA VPNNVTNLSR ALYLLQEQGL ITLKPGFTDP AKQQATPKDI AENPKHLKIL
EIESPQIPRS LDDVDLAVIN GNYALEAGLN PATDALGLEK AEGNPYANIL VTTPTLENDP
RIKQLAKDLQ LQEVAKFITE KYAGSVIPVA GTQP