Gene YpAngola_A1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1540 
Symbol 
ID5800008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1591034 
End bp1591822 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID641339489 
Productiron chelate ABC transporter ATP-binding protein 
Protein accessionYP_001606049 
Protein GI162419221 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.311202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGG GTTTACGTAT TGAGCGTTTT TATGCGGGCT ATCCCAAACG GCCAGTGATC 
CAAAACCTGA ATGTCCCCTT GATCCCTCGC GGCAAAATTA CCGTATTACT GGGGCCGAAT
GGCAGTGGTA AATCAACCTT ATTGCGCTCA CTGGCAGGTT TGAACCGCGC AGAAGGCCAG
TTGTGGTTAG ACGGCAGCGA CCTGATGAAA ATGCCGTTTA CCCAGCGGGC AGAAAAAGTG
GTCTATTTGC CACAATCTTT GCCGGCGGGT GTGCATTTAC ATGTGCTGGA ATCGATTATC
GTGGCACAGC GAGCCTCCGG TGGCCGCAGT AATACTCGCA GTGAGGCCCA AGTCATGGCG
TTGTTGGAAC GGCTGGGAAT TGCCCATTTA GCGCTGAGTT ATCTGGATCA ACTCTCTGGC
GGGCAGAAGC AACTGGTGGG TTTGGCACAA TCACTGATTC GCCAGCCGTC ACTGTTATTG
CTGGATGAAC CCCTCAGCGC CTTAGACCTT AACTATCAGT TCCATGTGAT GGACTTGGTA
CGTCAGGAAA CTCGTCAACG GAATATTGTT ACGGTGGTGG TGGTACATGA CATTAATATT
GCCTTGCGCC ATGGTGATCA TGTCCTGATG CTACAAAATG GTGCTTTGAT CGCCGATGGT
CAGCCAGAAG AGGTGATTAC ACCGCAAAGC TTGGCCAAGG TCTATGGCGT GAAAGGGCGT
ATTGAGCGTT GTTCACAAGG GACACCACAA GTATTAATTG ATGGATTGGT AACAGAACCG
ACAATGTAA
 
Protein sequence
MTAGLRIERF YAGYPKRPVI QNLNVPLIPR GKITVLLGPN GSGKSTLLRS LAGLNRAEGQ 
LWLDGSDLMK MPFTQRAEKV VYLPQSLPAG VHLHVLESII VAQRASGGRS NTRSEAQVMA
LLERLGIAHL ALSYLDQLSG GQKQLVGLAQ SLIRQPSLLL LDEPLSALDL NYQFHVMDLV
RQETRQRNIV TVVVVHDINI ALRHGDHVLM LQNGALIADG QPEEVITPQS LAKVYGVKGR
IERCSQGTPQ VLIDGLVTEP TM