| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1537 |
|---|
| Symbol | lysP |
|---|
| ID | 5800005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1586838 |
|---|
| End bp | 1588349 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641339486 |
|---|
| Product | lysine transporter |
|---|
| Protein accession | YP_001606046 |
|---|
| Protein GI | 162420410 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.807023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.123045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC AAAATACTAA AATCCCAGCG CAGCAGGGTG CACAGCGCTT ACGCCGGGAG
CTTAAATCGC GGCATTTAGC CATGATTGCT ATCGGTGGTT CTATTGGTAC CGGTTTATTT
GTTGCCTCTG GTGCAACGGT ATCGCAAGCC GGTCCAGGGG GGGCATTGCT CTCCTACGCA
TTGATTGGCT TGATGGTTTA CTTCCTGATG ACCAGCTTGG GAGAATTGGC TGCGTTCATG
CCAGTTTCAG GCTCATTCTC TACTTATGGT TCTAAATATG TCGAGGAAGG CTTTGGCTTT
GCCCTAGGTT GGAACTACTG GTACAACTGG GCGGTAACCA TCGCAGTTGA CTTGGTAGCC
GCACAGTTAG TGATGAACTA CTGGTTCCCG GACGCGCCCG GTTGGATCTG GAGTGCTTTA
TTCCTGGGCC TGATGTTCTT ACTGAACTAC ATCTCAGTGA AAGGTTTCGG TGAAGCGGAA
TATTGGTTCT CGCTGATTAA AGTGACAACC GTGGTTATCT TCATCATCGT TGGTGTCATG
ATGATCACCG GTATCATGAA AGGGGGCGAA ACGGCGGGTT GGCATAACTG GACTATCGGT
GATGCACCAT TTGCTGGTGG TTTCTCTGCC ATGATTGGGG TGGCCATGAT CGTCGGCTTC
TCCTTCCAAG GGACTGAATT GATTGGTATT GCGGCTGGGG AATCCAAAGA TCCAGGCAAA
AATATTCCAA AGGCAATTCG CAAAGTGTTC TGGCGTATTC TGTTGTTCTA TATCTTCGCT
ATTCTGATTA TTAGCCTGAT TATTCCGTAT ACCGATCCCA GTTTGTTACG CAACGATGTG
AAAGATATCA GCGTCAGCCC GTTCACACTG GTATTCCAGA ATGCGGGTCT GTTATCAGCA
GCGGCAGTGA TGAATGCGGT TATTTTGACC GCTGTTTTAT CGGCGGGTAA CTCGGGGATG
TATGCCTCGA CCCGTATGCT GTTTACCTTA GCCTCTGAAG GCAAAGCACC GCGTATTTTC
GCCAAGTTAT CTAAGGGCGG TGTCCCTCGT AATGCGCTGT ATGCCACGAC AGTCGTTGCA
GGTTTGTGCT TCCTGAGCTC CATGTTTGGT AACCAAACTG TGTATTTGTG GTTACTGAAT
ACCTCGGGGA TGACTGGGTT TATCGCCTGG TTGGGTATTG CCATCAGCCA CTACCGCTTC
CGTCGGGGCT ATATGATGCA GGGCCGTGAC TTGAACGACT TACCGTATCA GTCTGGTTTC
TTCCCTCTGG GGCCAATTTT TGCCTTCGTC CTGTGTCTAA TCATCACGTT AGGCCAGAAT
TATCAGGCAT TCCTGCAAGA CCGTATTGAT TGGTATGGCG TGACGGCAAC CTATATTGGT
ATTCCATTGT TCCTGGTGAT TTGGTTTGGC TATAAGCTCA GCCGTGGTAC CCGGGTAGTG
AAATACCAAG AGATGGAATT CCCAAAATGG CGTGATGAGA GTGAAGAGCA TCAGAAACCG
ACAAGTCGGT GA
|
|---|
| Protein sequence | MTQQNTKIPA QQGAQRLRRE LKSRHLAMIA IGGSIGTGLF VASGATVSQA GPGGALLSYA
LIGLMVYFLM TSLGELAAFM PVSGSFSTYG SKYVEEGFGF ALGWNYWYNW AVTIAVDLVA
AQLVMNYWFP DAPGWIWSAL FLGLMFLLNY ISVKGFGEAE YWFSLIKVTT VVIFIIVGVM
MITGIMKGGE TAGWHNWTIG DAPFAGGFSA MIGVAMIVGF SFQGTELIGI AAGESKDPGK
NIPKAIRKVF WRILLFYIFA ILIISLIIPY TDPSLLRNDV KDISVSPFTL VFQNAGLLSA
AAVMNAVILT AVLSAGNSGM YASTRMLFTL ASEGKAPRIF AKLSKGGVPR NALYATTVVA
GLCFLSSMFG NQTVYLWLLN TSGMTGFIAW LGIAISHYRF RRGYMMQGRD LNDLPYQSGF
FPLGPIFAFV LCLIITLGQN YQAFLQDRID WYGVTATYIG IPLFLVIWFG YKLSRGTRVV
KYQEMEFPKW RDESEEHQKP TSR
|
|---|
| |