Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1501 |
Symbol | spr |
ID | 5799969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1551717 |
End bp | 1552235 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641339451 |
Product | putative outer membrane lipoprotein |
Protein accession | YP_001606011 |
Protein GI | 162419373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCCG CATGCAGTTC ACCACAGGCT TCGAATGTAA ATAATACGCA AACTGAGATG CGTGCAGTTA ATGACAAAGA TGGGCTTTTA CTGCAAGCCT CTCAGGATGA ATTCGAAGCG ATGGTTCGCA ACGTTGACAT CAAGTCAAAG ATTTTAGAAC AGTATGCAGG TTGGAAAGGT GTTCGTTATC GTTTAGGCGG TAGCAGTAAA CGCGGTATTG ATTGTTCCGC ATTTGTACAA ACCACTTTCC GTGAACAGTT TGGTATGGAT TTGCCGCGCT CAACATCTCA GCAGCAGGAT CTCGGCAAGA AAGTCCAGCG GACTAAATTA CGTCCAGGTG ATCTTGTTCT ATTCCGCGCA GGCTCAACAG GGCGTCATGT CGGTATCTAT TTAGGTAACG ATAAATTTGT TCATGCATCG ACCAGTGCCG GTGTAACGAT ATCGAACCTG AATGACGATT ACTGGAATAA GCGTTATCGT GATGGGCGTC GAGTGCTAAG TAGCAGTTCG AGCAGCTAG
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Protein sequence | MLSACSSPQA SNVNNTQTEM RAVNDKDGLL LQASQDEFEA MVRNVDIKSK ILEQYAGWKG VRYRLGGSSK RGIDCSAFVQ TTFREQFGMD LPRSTSQQQD LGKKVQRTKL RPGDLVLFRA GSTGRHVGIY LGNDKFVHAS TSAGVTISNL NDDYWNKRYR DGRRVLSSSS SS
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