Gene YpAngola_A1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1491 
Symbolbcr 
ID5799959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1541338 
End bp1542537 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content50% 
IMG OID641339443 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_001606003 
Protein GI162418818 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.646257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAAAA ACCGGACATC CCACATTGGT TTGATTTTTA TCCTTGGGTT GTTGTCGATG 
CTGATGCCTT TGGCGATTGA TATGTATCTG CCAAGCATGC CGATTATTGC GCAGGAGTTT
GGGGTCGAGA GTGGCCGTGT GCAAATGACG CTGAGCGCAT ATGTACTGGG TTTTGCCATT
GGGCAAATGT TCTATGGGCC AATGGCTGAC AGCATCGGGC GTAAGCCGGT CATTTTTTGG
GGGACGCTGA TTTTTGCGCT TGCAGGTATG GCATGTGCGT TGGTGCAGTC GGTCGAGCAA
CTCATTAATA TGCGCTTCCT GCATGGCTTA TCCGCCGCCG CCGCAAGTGT GGTGATTAAT
GCCTTGATGC GCGATATGTT CACCAAAGAT GAGTTCTCCC GAATGATGTC TTTCGTGGTA
TTGGTGATGA CGATTGCCCC CTTGCTCGCA CCCATTATCG GTGGTGCACT GTTGGTGTGG
TTTAGCTGGC ATGCTATTTT CTGGACCATG GCGGGGGCGG CACTGGTTGG TGCGGTGTTA
GTGGCGCTGT TTATCCAAGA AACATTGCCT CCTGAACGGC GACAGAAATT TCATCTGCGC
ACGACCATAG GTAATTTTGG CTCGTTATTT CGCCACAAAC GCGTACTGAG CTATATGCTG
GCCAGTGGTT TCTCTTTTGC CGGTATGTTC TCATTCCTCA GCGCCGGTCC TTTTGTTTAT
ATCGATTTAA ACGGTGTTTC CCCGCAAAAC TTTGGTTATT ACTTTGCACT GAACATTGTC
TTTTTGTTCT TGATGACCTT TATCAACAGC CGTAATGTGC GCCGTTTCGG GGCGCTGAAA
ATGTTCCGTT TTGGCCTGAT AGTGCAATTT GTGATGGGGA TCTGGCTGGT AGTGGTTTGT
GTCGCTGGCC TAGGATTCTG GGCCTTAGTT CTGGGCGTAG CTGCCTATGT TGGGTGTATC
GCAATGATCA CGTCTAACGC GATGGCAGTG ATATTAGATG ATTTCCCGCA TATGGCAGGG
ACCGCCTCTT CTTTGGCGGG GACGTTGCGC TTTGGTATTG GTGCGGTGGT GGGGACGTTA
CTGCCGATGG CTTCGTCGCG CAGCGCCTGG CCAATGGTCA GTTCAATGGC ATTTTGTATT
ATTGTCGCGA TGTTGTTGTA TCTGTATGCC AGTCGCCCAA GTCATAAAAC CGTGTCATAA
 
Protein sequence
MQKNRTSHIG LIFILGLLSM LMPLAIDMYL PSMPIIAQEF GVESGRVQMT LSAYVLGFAI 
GQMFYGPMAD SIGRKPVIFW GTLIFALAGM ACALVQSVEQ LINMRFLHGL SAAAASVVIN
ALMRDMFTKD EFSRMMSFVV LVMTIAPLLA PIIGGALLVW FSWHAIFWTM AGAALVGAVL
VALFIQETLP PERRQKFHLR TTIGNFGSLF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IDLNGVSPQN FGYYFALNIV FLFLMTFINS RNVRRFGALK MFRFGLIVQF VMGIWLVVVC
VAGLGFWALV LGVAAYVGCI AMITSNAMAV ILDDFPHMAG TASSLAGTLR FGIGAVVGTL
LPMASSRSAW PMVSSMAFCI IVAMLLYLYA SRPSHKTVS