Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1489 |
Symbol | |
ID | 5799957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1538256 |
End bp | 1540013 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641339441 |
Product | putative helicase |
Protein accession | YP_001606001 |
Protein GI | 162420759 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.931099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTTCA CACTACGGCC TTATCAACGA GAAGCGGTCG ATGCCACGGT GGCTTATTTT CGACGCCACA CCACACCCGC ACTCATTGTT CTACCAACCG GCGCAGGCAA GAGTTTAGTG ATCGCAGAAC TTGCGAAACT GGCCCGTGGC CGTGTGTTGG TATTAGCGCA TGTCAAAGAG TTGGTAGCAC AGAATCACGC AAAATACTGC GCATACGGTC TTGAGGCCGA TATCTTTGCC GCCGGGTTGC AACAGCGACA AAGCGAGGGA AAAGTGGTCT TTGGCAGCGT GCAATCGGTG GCCCGTAATC TGCCGCTATT TGATAGCGCA TTTTCTCTGC TGATTATCGA TGAATGTCAT CGTATCAGCG ATGAAGATGA CAGCCAGTAT CAGCAAATCA TTCAGCATTT ACGCACGGGG AATCCGCAGT TACGGCTGTT GGGGCTGACG GCCACCCCTT ATCGGCTGGG GAAAGGCTGG ATTTATCAGT TCCACTATCA CGGTATTACT CGTGGTGATG AAAAAGCCCT GTTCCGTGAC TGTATTTATG AATTACCGCT GCGTTATATG ATTAAACATG GCTTTCTGGT GCCACCTGAA CGGCTGGACA TGCCGGTCGT ACAGTATGAT TTCAGCCGCC TGACCAGCAA CAGTGATGGC TTGTTCCGTG AGGCAGATTT AGATCGAGAA CTTAAGCAAC AACAAAGAAT TACCCCACAT ATTGTTAGCC AAATAATCGA ATATGCGGCT CAGCGTCGCG GTGTGATGAT TTTTGCCGCC ACCGTAGAGC ACGCCAAAGA AGTCTATGGC CTGTTGCCCA AAGGTGAAGC CGCGTTGGTC AGCGCGGGGA CCCCACCTAC GGAACGGGAT GCGCTGATCA ATGCCTTTAA ACAGCAACAA TTGCGCTATT TGGTCAATGT GTCGGTACTG ACCACCGGTT TTGATGCCCC CCATGTGGAT CTGATTGCCA TTCTTCGTCC AACCGAATCC ATCAGTTTAT ATCAACAAAT TGTTGGCCGA GGCCTGCGGC TGTTTCCCGG TAAAGAGGAT TGCTTGATTC TGGATTATGC GGGTAATCCC CATGACCTTT TCACGCCAGA AGTGGGCACG AGCAAACCTC ACAGCGGGAG CCAACCAGTA CAAGTCTTCT GCCCCGATTG TGGTTTTGCC AATATCTTCT GGGGGAAATG CACTGAGTCC GGCGAAATAA TTGAGCACTA TGGCCGCCGC TGTCAGGGCT GGTTTGAGGA TGATCAGGGT GCACGTGCGC AATGTGACTA CCGTTTTCGC TTTAAATCCT GCCCACATTG CGGAGCAGAA AATGATATTG CCGCCCGTCG CTGCCATCAA TGCCAGGCGG TTTTGGTCGA TCCCGACGAT ATGCTGAAAG CCGCCCTGAA ACTGAAAGAT GCGCTGGTAT TGCGCTGTGG CGGTATGCAG CTAGAAACGG GCCAAGACGC CAAAGGCGAG TGGCTGAAAG CGACCTATTA CGATGAGGAT GGCACCAATA CCAGTGAGCG CTTCCGATTA ACCACACCTG CACAACGTAT GGCATTCGAA CAGATATTCC TGCGCCCTCA CCAGCGCGCA CCGGGCATTG CCCTAAAATG GCACACCGCC GCTGATATTA TCGCGCAGCA GGCGTTGCTA CGTTATCCGG ATTTTGTGGT CGCCCGCCGT CGGGGGCAGT GGTGGCAAAT CAGGGAGAAG GTATTTGATT ACAAGGGGCG TTTTCGGCGG GCCGATGCCC TTGCCTGA
|
Protein sequence | MAFTLRPYQR EAVDATVAYF RRHTTPALIV LPTGAGKSLV IAELAKLARG RVLVLAHVKE LVAQNHAKYC AYGLEADIFA AGLQQRQSEG KVVFGSVQSV ARNLPLFDSA FSLLIIDECH RISDEDDSQY QQIIQHLRTG NPQLRLLGLT ATPYRLGKGW IYQFHYHGIT RGDEKALFRD CIYELPLRYM IKHGFLVPPE RLDMPVVQYD FSRLTSNSDG LFREADLDRE LKQQQRITPH IVSQIIEYAA QRRGVMIFAA TVEHAKEVYG LLPKGEAALV SAGTPPTERD ALINAFKQQQ LRYLVNVSVL TTGFDAPHVD LIAILRPTES ISLYQQIVGR GLRLFPGKED CLILDYAGNP HDLFTPEVGT SKPHSGSQPV QVFCPDCGFA NIFWGKCTES GEIIEHYGRR CQGWFEDDQG ARAQCDYRFR FKSCPHCGAE NDIAARRCHQ CQAVLVDPDD MLKAALKLKD ALVLRCGGMQ LETGQDAKGE WLKATYYDED GTNTSERFRL TTPAQRMAFE QIFLRPHQRA PGIALKWHTA ADIIAQQALL RYPDFVVARR RGQWWQIREK VFDYKGRFRR ADALA
|
| |