Gene YpAngola_A1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1489 
Symbol 
ID5799957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1538256 
End bp1540013 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content53% 
IMG OID641339441 
Productputative helicase 
Protein accessionYP_001606001 
Protein GI162420759 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.931099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCA CACTACGGCC TTATCAACGA GAAGCGGTCG ATGCCACGGT GGCTTATTTT 
CGACGCCACA CCACACCCGC ACTCATTGTT CTACCAACCG GCGCAGGCAA GAGTTTAGTG
ATCGCAGAAC TTGCGAAACT GGCCCGTGGC CGTGTGTTGG TATTAGCGCA TGTCAAAGAG
TTGGTAGCAC AGAATCACGC AAAATACTGC GCATACGGTC TTGAGGCCGA TATCTTTGCC
GCCGGGTTGC AACAGCGACA AAGCGAGGGA AAAGTGGTCT TTGGCAGCGT GCAATCGGTG
GCCCGTAATC TGCCGCTATT TGATAGCGCA TTTTCTCTGC TGATTATCGA TGAATGTCAT
CGTATCAGCG ATGAAGATGA CAGCCAGTAT CAGCAAATCA TTCAGCATTT ACGCACGGGG
AATCCGCAGT TACGGCTGTT GGGGCTGACG GCCACCCCTT ATCGGCTGGG GAAAGGCTGG
ATTTATCAGT TCCACTATCA CGGTATTACT CGTGGTGATG AAAAAGCCCT GTTCCGTGAC
TGTATTTATG AATTACCGCT GCGTTATATG ATTAAACATG GCTTTCTGGT GCCACCTGAA
CGGCTGGACA TGCCGGTCGT ACAGTATGAT TTCAGCCGCC TGACCAGCAA CAGTGATGGC
TTGTTCCGTG AGGCAGATTT AGATCGAGAA CTTAAGCAAC AACAAAGAAT TACCCCACAT
ATTGTTAGCC AAATAATCGA ATATGCGGCT CAGCGTCGCG GTGTGATGAT TTTTGCCGCC
ACCGTAGAGC ACGCCAAAGA AGTCTATGGC CTGTTGCCCA AAGGTGAAGC CGCGTTGGTC
AGCGCGGGGA CCCCACCTAC GGAACGGGAT GCGCTGATCA ATGCCTTTAA ACAGCAACAA
TTGCGCTATT TGGTCAATGT GTCGGTACTG ACCACCGGTT TTGATGCCCC CCATGTGGAT
CTGATTGCCA TTCTTCGTCC AACCGAATCC ATCAGTTTAT ATCAACAAAT TGTTGGCCGA
GGCCTGCGGC TGTTTCCCGG TAAAGAGGAT TGCTTGATTC TGGATTATGC GGGTAATCCC
CATGACCTTT TCACGCCAGA AGTGGGCACG AGCAAACCTC ACAGCGGGAG CCAACCAGTA
CAAGTCTTCT GCCCCGATTG TGGTTTTGCC AATATCTTCT GGGGGAAATG CACTGAGTCC
GGCGAAATAA TTGAGCACTA TGGCCGCCGC TGTCAGGGCT GGTTTGAGGA TGATCAGGGT
GCACGTGCGC AATGTGACTA CCGTTTTCGC TTTAAATCCT GCCCACATTG CGGAGCAGAA
AATGATATTG CCGCCCGTCG CTGCCATCAA TGCCAGGCGG TTTTGGTCGA TCCCGACGAT
ATGCTGAAAG CCGCCCTGAA ACTGAAAGAT GCGCTGGTAT TGCGCTGTGG CGGTATGCAG
CTAGAAACGG GCCAAGACGC CAAAGGCGAG TGGCTGAAAG CGACCTATTA CGATGAGGAT
GGCACCAATA CCAGTGAGCG CTTCCGATTA ACCACACCTG CACAACGTAT GGCATTCGAA
CAGATATTCC TGCGCCCTCA CCAGCGCGCA CCGGGCATTG CCCTAAAATG GCACACCGCC
GCTGATATTA TCGCGCAGCA GGCGTTGCTA CGTTATCCGG ATTTTGTGGT CGCCCGCCGT
CGGGGGCAGT GGTGGCAAAT CAGGGAGAAG GTATTTGATT ACAAGGGGCG TTTTCGGCGG
GCCGATGCCC TTGCCTGA
 
Protein sequence
MAFTLRPYQR EAVDATVAYF RRHTTPALIV LPTGAGKSLV IAELAKLARG RVLVLAHVKE 
LVAQNHAKYC AYGLEADIFA AGLQQRQSEG KVVFGSVQSV ARNLPLFDSA FSLLIIDECH
RISDEDDSQY QQIIQHLRTG NPQLRLLGLT ATPYRLGKGW IYQFHYHGIT RGDEKALFRD
CIYELPLRYM IKHGFLVPPE RLDMPVVQYD FSRLTSNSDG LFREADLDRE LKQQQRITPH
IVSQIIEYAA QRRGVMIFAA TVEHAKEVYG LLPKGEAALV SAGTPPTERD ALINAFKQQQ
LRYLVNVSVL TTGFDAPHVD LIAILRPTES ISLYQQIVGR GLRLFPGKED CLILDYAGNP
HDLFTPEVGT SKPHSGSQPV QVFCPDCGFA NIFWGKCTES GEIIEHYGRR CQGWFEDDQG
ARAQCDYRFR FKSCPHCGAE NDIAARRCHQ CQAVLVDPDD MLKAALKLKD ALVLRCGGMQ
LETGQDAKGE WLKATYYDED GTNTSERFRL TTPAQRMAFE QIFLRPHQRA PGIALKWHTA
ADIIAQQALL RYPDFVVARR RGQWWQIREK VFDYKGRFRR ADALA