Gene YpAngola_A1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1473 
Symbol 
ID5799941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1524627 
End bp1525763 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content54% 
IMG OID641339427 
Productbaseplate J-like protein 
Protein accessionYP_001605988 
Protein GI162418497 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.700179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTTA ATCGACCCAC GTTAAGTGAA TTGCGGCAGC GGAATCAGTC TTATATTCAA 
TCGGAACTGA AAACCGGCGG CAATTTATTG CGTTTCTCTA ATATCGGCGT GATCAGTGAT
GCCGATGCCG GGATGGCGCA CCTGCATTAC GGCTATCTGG ATTATATCGC CCGGCAAGCC
ACCCCCTATA ATGCTACCGA CGAGTATCTG GCGGCTTGGG GGGCGCTGAA AGATGTGTTC
CGCAAAGCGG CCAATCCCGC CACCAGTAAC GAGGTCCGGT TCAGCGGTAT TGCCGGGCGA
GTTATTCCTG CTGGTCGCCT GCTGAACCGG GCCGATGGTT ACCAGTATCA GCTTAATAAA
GAAGTCATTA TTGCCGAGCA GGGCAGTGCG CTCGGTGAAA TTACCGCTAT CTTGCCCAGC
CCGTTGGACG ATGCAACTGG CGGCGGCAAT CGGGGTAACA GCCCGGCGGG AACGGTACTG
ACGCTGGATA TTGCAATTGA CGGGGTTCAG GCCACGGCCA CCGCGTTGAC TAAAATTTCT
GGTGGTGCGG ATATTGAATC AGAAGATGCA TTTCGTTCTC GAATGTTATT GGCCTACCAG
AACGTCCCGC AAGGTGGCAA TGACACCGAT TATCAATCCT GGGCATTAGC GGTACCGGGA
GTCACTCGCT GCTGGGTGAA ACGGCGGTTG ATGGGGGCGG GCACCGTAGG GGTGTATATC
ATGTGCGATG ATAACGACCA CGGCGGCTTC CCGCAGGGAA CTGACGGCAT TTCATCCCTT
GAAGAGTGGG GGGCGGTAAA AGCCACTGGC GATCAGGGGC GGGTAGCGGA CGCAATCTAT
CCACAACAAC CTATTATTGC TCTGGTGTAT GTTTGCGCGC CTGTCGCTCA AGCGATTGAT
TTTGTGATCA GCGGCATCTC TTATGCTGAC AGTACAACAA CCGCCGCCAT CAATACCGCT
ATTGATGAGG TGTTTTTCAC CGAAGGGCAA CCCGGTGGAA AAATCCTGTG GTCGTCGCTG
TTGCTGGCCA TCGGCGAAGT ACCTGGAAGC GGGGGGTTTA TTATGGCATC CCCGTCGGCC
AATATTGAAC TGCAAACTGG CAAACTCCCC GTTCGGGGTA CAGTGAGTTA CCTATGA
 
Protein sequence
MPFNRPTLSE LRQRNQSYIQ SELKTGGNLL RFSNIGVISD ADAGMAHLHY GYLDYIARQA 
TPYNATDEYL AAWGALKDVF RKAANPATSN EVRFSGIAGR VIPAGRLLNR ADGYQYQLNK
EVIIAEQGSA LGEITAILPS PLDDATGGGN RGNSPAGTVL TLDIAIDGVQ ATATALTKIS
GGADIESEDA FRSRMLLAYQ NVPQGGNDTD YQSWALAVPG VTRCWVKRRL MGAGTVGVYI
MCDDNDHGGF PQGTDGISSL EEWGAVKATG DQGRVADAIY PQQPIIALVY VCAPVAQAID
FVISGISYAD STTTAAINTA IDEVFFTEGQ PGGKILWSSL LLAIGEVPGS GGFIMASPSA
NIELQTGKLP VRGTVSYL