| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1461 |
|---|
| Symbol | |
|---|
| ID | 5799929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1514446 |
|---|
| End bp | 1515240 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641339415 |
|---|
| Product | AP endonuclease |
|---|
| Protein accession | YP_001605976 |
|---|
| Protein GI | 162418325 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.331039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.325369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAAT TCGCAGCCAA TCTAACGTGG TTATTTACCG AGGTGCCATT TTTACAGCGC
TTTGCTTTGG CCGCTAAGGC TGGGTTCCCG GCAGTAGAGT GCCTTTTCCC CTATCAGGAA
CAGATCGCCG ATGTGCAACA AGCACAAAAA GCGAGCGGCA TTCCGGTAGT TTTGATCAAT
GCCCCTGCGG GAGAATGGGA AAATGGCCAG CGGGGACTCG CCTCACTGCC CGATGCTGGC
GAGCCGTTTC GCCACAGTGT GCGGCTGGCG CGTGAATATG CCGTGGCATT GGGATGTAAA
CAGATTCATA TCATGGCTGG CAATAGAGAA GAGAGTATCA CTTTCGATGA GCAATATGCG
TTACTGATTG AACGATTACG TTATGCTGCA GACTATTTAA TGGCTGACAA TATCAGGGTG
CTTATTGAAC CTTTAAATAA TGACAATATG CCGGGTTATT TTATTTCATC ATTTCCGCTG
GCGGAAAAAA TAATTCACCA GTGTGAGAGA AAGAATATTT TTTTACAGTT TGATGTTTAC
CATTGCCAAA AAATACACGG CAACCTATGG GCCAACCTAC AACATTACTG GCCGTTAATT
TCACATATAC AGATAGCCTC GGTACCTGAA CGGCATGAAC CGAATAAAGG CGAGGTCAAC
TACCCTTGGT TATTCCAACA ACTGGTAATA AAAAATTATC CAGGCTGGAT TGGATGTGAA
TATCAACCCG AAAATGAAAC ATTCTCAGGG TTGGGATGGT TGGGAAAAAA TAAAAATATC
AAGGCGTTTT CATAG
|
|---|
| Protein sequence | MLKFAANLTW LFTEVPFLQR FALAAKAGFP AVECLFPYQE QIADVQQAQK ASGIPVVLIN
APAGEWENGQ RGLASLPDAG EPFRHSVRLA REYAVALGCK QIHIMAGNRE ESITFDEQYA
LLIERLRYAA DYLMADNIRV LIEPLNNDNM PGYFISSFPL AEKIIHQCER KNIFLQFDVY
HCQKIHGNLW ANLQHYWPLI SHIQIASVPE RHEPNKGEVN YPWLFQQLVI KNYPGWIGCE
YQPENETFSG LGWLGKNKNI KAFS
|
|---|
| |