| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1451 |
|---|
| Symbol | |
|---|
| ID | 5799919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1505078 |
|---|
| End bp | 1506106 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641339406 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001605967 |
|---|
| Protein GI | 162420788 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0112394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.158925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCTG CAACAGCGGT TGGCAGTAAA GGACGTAAAA TGGCGAAGAA AAACCCCTAT
TATGATGCCA GCAAGCCACA TCACACAGAG TTTGGATTTC AGAATATAGA ACCGGTTGTT
CATCATCCGC AGGATTTGAA ACGCTGGCGT GAAGAGAGAA AGCGCCAGTC GCTGCCTAAG
CCGCCTCAGC AGGGCTACCC GCAGTTCGTT ACAGATTGGT GGCAACAAGC TGACTTTTCA
GGGCAGCAAG ATGCGTTGTG GTGGCTTGGT CATGCTTCAT TATTGTTACG TATCAGTGGG
CAGGCAGTGT TGTTTGACCC TGTGCTTTCA AGCCGGGTTT CACCGGTTAA TTTTTATGGC
CCACAGCGCA AAACACCAAT ACCCGCCAGC GTACAGCAAC TGCCCGATAT TGATGTGATC
GTGATCTCTC ATAATCATTA CGATCACTTG GATGTCACGA CTATCACGCA ATTATTGCGC
CGTTTCCCTG ACGTGGTGTT TTTGGTCCCA TTAGGGCTGA AAAACTGGTT GCGGCAGCAT
GGTGCTCGCC ATGTTCATGA GTTGGATTGG TGGGATCAAC GGCTCGTCGC TGACTTTGAG
TTCCATTGTG TGCCCGCCCG TCATTGGAGT ATGCGCACTC CTTGGGATCG GAATCACAGT
TTGTGGTCTG GCTGGGTAGT GAAGCGGGGC GAAGTTAACT TTTATTTCAG TGGTGATACT
GGCTATTGCC AGCAATTACT GGATATCGGT GAGGCACTGG GGCCATTCAA TTATGCGGCA
CTGCCAATTG GTGCTTATGC ACCACGCTGG TTTATGCAGG CGCAACATAT GGATCCACAA
CAATCGGTGC AATTGTTTCA AAAATTACAC CAACCGGTGA CGATCCCGAT TCATTGGGGG
GTCTTTGAAC TGGCTGATGA GCCATTGGAT GAACCACCAG AACAACTTCA ACAGGCGTTA
ACCGATGCCG GAGTGGCGCA CAATAAATTC GTACCAATTA AAATAGGTGC ACGGATCATA
CTGGAATAG
|
|---|
| Protein sequence | MLAATAVGSK GRKMAKKNPY YDASKPHHTE FGFQNIEPVV HHPQDLKRWR EERKRQSLPK
PPQQGYPQFV TDWWQQADFS GQQDALWWLG HASLLLRISG QAVLFDPVLS SRVSPVNFYG
PQRKTPIPAS VQQLPDIDVI VISHNHYDHL DVTTITQLLR RFPDVVFLVP LGLKNWLRQH
GARHVHELDW WDQRLVADFE FHCVPARHWS MRTPWDRNHS LWSGWVVKRG EVNFYFSGDT
GYCQQLLDIG EALGPFNYAA LPIGAYAPRW FMQAQHMDPQ QSVQLFQKLH QPVTIPIHWG
VFELADEPLD EPPEQLQQAL TDAGVAHNKF VPIKIGARII LE
|
|---|
| |