Gene YpAngola_A1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1430 
SymboluvrB 
ID5799897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1485624 
End bp1487639 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content50% 
IMG OID641339385 
Productexcinuclease ABC subunit B 
Protein accessionYP_001605949 
Protein GI162419328 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT CATTCAAACT GCATTCTGTG TTTAAGCCAG CTGGCGATCA GCCTGAGGCT 
ATCCGTAAAT TGGAGGAGGG GCTGGAAAAT GGTCTGGCAC ACCAGACCCT GCTAGGCGTA
ACAGGATCAG GCAAAACCTT TACGGTTGCT AATGTTATTG CCGATCTGAA CCGGCCAACC
ATGATCCTGG CCCCGAACAA AACACTGGCA GCGCAACTTT ACGGCGAGAT GAAAGAGTTC
TTCCCGGATA ACGCGGTAGA GTACTTTGTC TCCTACTACG ATTATTATCA ACCTGAAGCT
TACGTGCCCA GTTCTGATAC TTTTATTGAG AAGGATGCGT CGGTCAATGA ACACATCGAG
CAGATGCGGC TATCCGCCAC CAAGGCCTTG TTAGAGCGGC GAGATGTGGT GGTCGTGGCG
TCGGTTTCCG CCATTTATGG TCTGGGCGAT CCAGATCTGT ATCTGAAAAT GATGTTGCAC
CTAACCCGTG GCATGATCAT TGATCAACGT TCCATTTTAC GTCGCCTGTC AGAATTGCAA
TACAGCCGCA ACGATCAGGT ATTTCAACGC GGTACTTTTC GGGTTCGGGG TGAAGTGATC
GATATCTTCC CGGCAGAATC TGATGAGTGG GCGCTGCGGG TAGAATTATT TGATGAGGAA
GTCGAGCGAT TATCCATTTT CGATCCACTC ACGGGTCAGC TACAGCATGA AGTCCCTCGC
TTTACTGTTT ATCCTAAAAC ACACTACGTC ACCCCACGGG AACGCATTCT ACAGGCGATG
GAAGAGATAA AAGTCGAGCT GGCGGAGCGG CGTCAGGTGT TGTTAGCCAA TAACAAATTA
TTGGAAGAGC AACGTCTCTC CCAACGTACT CAGTTTGATC TTGAAATGAT GAATGAGCTG
GGCTATTGCT CGGGTATCGA AAACTATTCT CGCTATCTCT CTGGCCGTGG GCCGGGTGAA
GCGCCTCCCA CGTTATTTGA CTATTTACCG GCTGATGGTT TGTTGATTGT CGATGAGTCC
CACGTCACTA TTCCGCAAAT TGGTGGCATG TACAAAGGCG ACCGCTCACG TAAAGAAACC
CTGGTAGAGT ACGGTTTCCG TTTGCCATCG GCACTGGATA ACCGGCCAAT GCGCTTTGAA
GAGTTCGAAG CGTTGGCACC GCAAACGATC TATGTTTCGG CCACACCGGG CAAATACGAG
CTGGAGAAAT CTGGCGGTGA CATTATTGAG CAAGTGGTGC GGCCAACGGG CCTACTCGAT
CCGTTGATCG AGGTCCGTCC GGTAGCCACA CAAGTGGATG ACTTGCTGTC AGAGATCCGC
ATCCGTGCTG CGATTAACGA GCGGGTACTG GTGACCACGC TAACGAAACG GATGGCCGAG
GACTTAACCG ACTATCTCAG CGAGCATGGC GCCAAAGTAC GTTACCTGCA TTCAGATATC
GATACTGTGG AGCGGGTGGA GATTATTCGC GATTTACGCT TGGGTGAATT TGATGTGCTG
GTGGGCATCA ACTTGCTGCG GGAAGGGTTG GATATGCCAG AGGTCTCATT GGTTGCCATT
CTTGATGCAG ATAAAGAGGG CTTCTTGCGT TCTGAACGCT CCTTGATTCA GACTATTGGT
CGTGCTGCCC GTAACCTCAA CGGCAAGGCG ATTTTATACG GCGATAGAAT TACCGCCTCG
ATGGAAAAAG CCATTGGCGA AACGGAACGG CGGCGCGCTA AACAGCAGGC GTATAATGAA
GAACGCAGGA TTATTCCTCA GGGGCTAAAC AAAAAGATTG GCGATATCCT GCAATTGGGC
CAGCCTTCAA TGCGCGGCAA AGGAAAAGGG CGCGGCAGTC ATAAAATGGC CGATACCACC
CAATATCAAT CTTTGTCGCC GAAAGCACTT GATCAGAAAA TCCGTGAACT GGAAGCAAAA
ATGTATACAT ATGCGCAAAA CCTGGAGTTT GAACAGGCGG CTGAATTACG TGATCAGGTT
CATCAACTGC GGCAACAGTT TATTGCAATA TCTTAA
 
Protein sequence
MSKSFKLHSV FKPAGDQPEA IRKLEEGLEN GLAHQTLLGV TGSGKTFTVA NVIADLNRPT 
MILAPNKTLA AQLYGEMKEF FPDNAVEYFV SYYDYYQPEA YVPSSDTFIE KDASVNEHIE
QMRLSATKAL LERRDVVVVA SVSAIYGLGD PDLYLKMMLH LTRGMIIDQR SILRRLSELQ
YSRNDQVFQR GTFRVRGEVI DIFPAESDEW ALRVELFDEE VERLSIFDPL TGQLQHEVPR
FTVYPKTHYV TPRERILQAM EEIKVELAER RQVLLANNKL LEEQRLSQRT QFDLEMMNEL
GYCSGIENYS RYLSGRGPGE APPTLFDYLP ADGLLIVDES HVTIPQIGGM YKGDRSRKET
LVEYGFRLPS ALDNRPMRFE EFEALAPQTI YVSATPGKYE LEKSGGDIIE QVVRPTGLLD
PLIEVRPVAT QVDDLLSEIR IRAAINERVL VTTLTKRMAE DLTDYLSEHG AKVRYLHSDI
DTVERVEIIR DLRLGEFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR SERSLIQTIG
RAARNLNGKA ILYGDRITAS MEKAIGETER RRAKQQAYNE ERRIIPQGLN KKIGDILQLG
QPSMRGKGKG RGSHKMADTT QYQSLSPKAL DQKIRELEAK MYTYAQNLEF EQAAELRDQV
HQLRQQFIAI S