Gene YpAngola_A1398 details

Gene Information

• Locus tag: YpAngola_A1398
• Symbol: pal
• ID: 5799865
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: +
• Start bp: 1456395
• End bp: 1456901
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641339356
• Product: peptidoglycan-associated outer membrane lipoprotein
• Protein accession: YP_001605923
• Protein GI: 162418864
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000375397
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 69
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACTGA ACAAAGTGCT AAAAGGGCTA ATGTTGGCTT TGCCTGTTCT GGCTGTGGCG 
GCTTGTAGTT CCAACAAAAG CGCAAATAAT GACCAATCTG GCATGGGCGC TGGCACTGGT 
ACAGAGAACG GCAGCAACCT GTCTTCTGAA GAGCAAGCAC GTCTTCAGAT GCAAGAACTG 
CAAAAGAACA ACATCGTTTA CTTCGGTTTC GATAAATACG ATATCGGTTC TGACTTCGCT 
CAAATGCTGG ATGCACATGC TGCATTCCTG CGTAGCAACC CATCTGACAA AGTTGTTGTT 
GAAGGCCACG CGGATGAACG CGGTACGCCA GAATACAACA TCGCTTTGGG TGAGCGTCGT 
GCTAGCGCAG TGAAAATGTA CCTGCAAGGT AAAGGCGTTT CTGCTGACCA GATCTCTATC 
GTTTCTTACG GTAAAGAGAA ACCAGCAGTA CTGGGCCATG ACGAAGCAGC CTTTGCTAAA 
AACCGTCGTG CAGTTCTGGT TTACTAA 

 

Protein sequence

MQLNKVLKGL MLALPVLAVA ACSSNKSANN DQSGMGAGTG TENGSNLSSE EQARLQMQEL 
QKNNIVYFGF DKYDIGSDFA QMLDAHAAFL RSNPSDKVVV EGHADERGTP EYNIALGERR 
ASAVKMYLQG KGVSADQISI VSYGKEKPAV LGHDEAAFAK NRRAVLVY