Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1382 |
Symbol | sdhA |
ID | 5799849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1438271 |
End bp | 1440037 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641339341 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001605908 |
Protein GI | 162418915 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.332477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.921061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC CAATCAGAGA GTTTGATGCA GTTGTTGTCG GTGCAGGTGG TGCCGGTATG CGTGCCGCCC TGCAAATTTC ACAAATGGGC CTGTCTTGCG CCCTGATATC TAAAGTCTTC CCTACCCGTT CCCATACCGT ATCTGCGCAG GGGGGGATTA CCGTTGCGCT GGGTAATACC CATGAAGATA ACTGGGAATG GCACATGTAC GATACGGTAA AGGGTTCCGA TTATATCGGC GATCAGGATG CCATCGAATA TATGTGTAAA ACCGGTCCGG AAGCGGTTCT GGAATTGGAG CACATGGGTT TACCTTTCTC CCGTTTAGAG GATGGGAGCA TTTATCAGCG TCCATTTGGG GGGCAGTCAC TGAACTTTGG CGGTGGGCAA GCGGCGCGTA CAGCGGCTGC AGCTGACCGC ACCGGTCATG CGTTGTTACA CACCCTTTAT CAGCAAAACC TGAAAAACCA CACCACTATT TTCTCTGAAT GGTATGCACT GGATTTGGTG AAGAATCAGG ACGGCGCTTT TGTCGGTTGT ACTGCTATTA ATATTGAAAC CGGCGAAGTC GTCTATTTCA AAGCACGGGC CACAATATTG GCAACTGGCG GTGCTGGGCG TATTTACCAA TCAACAACCA ATGCGCACAT TAATACCGGT GACGGTGTTG GTATGGCCTT GCGTGCTGGA GTCCCGGTGC AGGACATGGA AATGTGGCAG TTCCACCCGA CCGGTATTGC CGGTGCGGGT GTATTAGTGA CTGAAGGCTG CCGCGGTGAA GGGGGGTATT TACTGAATAA ACATGGTGAA CGCTTCATGG AACGTTATGC CCCGAACGCC AAAGATTTGG CGGGTCGTGA TGTAGTGGCA CGTTCCATTA TGATTGAAAT CCGTGAAGGA CGTGGTTGTG ACGGTCCTTG GGGCCCACAT GCCAAACTGA AATTGGATCA CTTAGGTAAA GATGTGCTTG AATCCCGTCT GCCGGGTATT CTTGAGCTGT CGCGCACCTT TGCACACGTT GACCCGATCA AAGAACCGAT CCCGGTTATC CCTACTTGCC ATTATATGAT GGGGGGAATT CCGACTAAAG TGACGGGTCA GGCGATTACC GTAAATGAAA AGGGTGAGGA TGTTGTGATC CCCGGCTTGT TTGCTGTAGG CGAAATTGCC TGTGTTTCCG TCCACGGTGC GAACCGCTTG GGAGGGAACT CATTACTGGA CTTAGTGGTA TTTGGTCGTG CTGCCGGTAT GCACCTGCAA GAATCATTGA TGGAGCAGGG CGCAAGCCGC GATGCCAGTG AGTCAGATAT CGAAGCCTCT CTGGCTCGCA TGAATCGCTG GAATAATACC CGTTCAGGTG AAGATCCAGT TGAAATCCGT AAAGCATTGC AAGCCTGTAT GCAGAACAAT TTCTCCGTGT TCCGCGAAGG CGATGCGATG GCAAAAGGGT TGGAAGAGCT GAAAACTATC CGTGAACGTT TGCAAAATGC CCGTTTGGAT GACACTTCCA GTGAATTCAA TACTCAGCGT ATTGAGTGCC TGGAGCTGGA TAACCTGATG GAAACTGCGT TTTCAACCGC TGTGTCGGCA AACTTCCGTA CCGAGAGCCG AGGTGCCCAT AGCCGCTTCG ATTTCCCGGA TCGTGATGAT GTGAACTGGC TGTGCCATTC ACTGTATTTG CCAGGTACTG AGAGCATGAC CCGCCGTGAG GTAAACATGC AACCTAAGCT ACGCGAGGCA TTCCCGCCGA AAGTGCGTTC TTATTGA
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Protein sequence | MNLPIREFDA VVVGAGGAGM RAALQISQMG LSCALISKVF PTRSHTVSAQ GGITVALGNT HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAVLELE HMGLPFSRLE DGSIYQRPFG GQSLNFGGGQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAFVGC TAINIETGEV VYFKARATIL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG RGCDGPWGPH AKLKLDHLGK DVLESRLPGI LELSRTFAHV DPIKEPIPVI PTCHYMMGGI PTKVTGQAIT VNEKGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGMHLQ ESLMEQGASR DASESDIEAS LARMNRWNNT RSGEDPVEIR KALQACMQNN FSVFREGDAM AKGLEELKTI RERLQNARLD DTSSEFNTQR IECLELDNLM ETAFSTAVSA NFRTESRGAH SRFDFPDRDD VNWLCHSLYL PGTESMTRRE VNMQPKLREA FPPKVRSY
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