Gene YpAngola_A1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1300 
SymbollexA 
ID5799766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1356595 
End bp1357203 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content51% 
IMG OID641339265 
ProductLexA repressor 
Protein accessionYP_001605833 
Protein GI162419551 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones87 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TAACTACCAG ACAGCAAGAG GTTTATGACC TGGTCCGCGA TCACCTAGCG 
CAAACAGGTA TGCCACCGAC CCGTGCCGAG ATTGCGCAGC GTCTGGGGTT TCGCTCTCCT
AACGCTGCTG AAGAGCATTT AAAAGCGCTG GCCCGTAAAG GTGTCATTGA AATTGTCTCA
GGAGCTTCCC GTGGCATTCG TTTGCTGATG GAAGAAGAAG AGGGCCTGCC ACTGATTGGC
CGGGTTGCCG CAGGTGAGCC ATTGCTGGCA CAGCAACATA TTGAAGGGCA TTACAAGGTT
GACCCATCCC TGTTCAAGCC AGGTGCGGAT TTCCTGCTGC GGGTTAATGG GATGTCGATG
AGAGATATCG GTATTCTAGA TGGTGACTTG TTGGCGGTAC ATAAAACGCA GGATGTGCGT
AATGGGCAAG TTGTCGTCGC GCGCATTGAT GATGAAGTCA CGGTAAAACG TTTGAAAAAA
CAAGGTAATA TCGTGCATCT CTTACCAGAA AACAGCGAGT TTCAGCCTAT CGTTGTTGAT
CTGCGTGAGC AGAGTTTTAC CATTGAAGGT TTGGCCGTCG GAGTTATCCG TAACGGGGAC
TGGATCTGA
 
Protein sequence
MKALTTRQQE VYDLVRDHLA QTGMPPTRAE IAQRLGFRSP NAAEEHLKAL ARKGVIEIVS 
GASRGIRLLM EEEEGLPLIG RVAAGEPLLA QQHIEGHYKV DPSLFKPGAD FLLRVNGMSM
RDIGILDGDL LAVHKTQDVR NGQVVVARID DEVTVKRLKK QGNIVHLLPE NSEFQPIVVD
LREQSFTIEG LAVGVIRNGD WI