Gene YpAngola_A1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1272 
Symbol 
ID5799738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1330606 
End bp1331292 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID641339238 
Productputative ABC transporter ATP-binding protein YbbA 
Protein accessionYP_001605807 
Protein GI162420038 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.708247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.747295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGG AAAACGTTCT TGAAGTTCAT CATCTTAATA AGCACGTCGG TCAGGGTGAG 
CAACAGCTCT CCATCCTTAC CGGAGTTGAG CTGGTTGTCA AACCTGCCCA GACAATTGCG
CTGATTGGCG AGTCGGGTTC AGGCAAATCA ACATTATTGG GGATTCTGGC CGGGCTGGAT
GATGGCAGCA GCGGTGATGT GAGCTTGCTT GGGCAGTCAT TGACCACGAT GGATGAAGAA
GGTCGCGCGC TACTCCGGGC GAAAAATGTC GGCTTTGTCT TTCAGTCGTT TATGTTGGTT
CCTACATTGA ACACGCTTGA AAACGTTCAA CTACCGGCAT TACTCCGTGG TGAGAGTGAT
CGCCAAAGCA AATCGCAAGC TATTGAATTA TTGGAGCAAC TTGGGCTGAG CAAGCGCCTT
TACCATCTTC CCGCCCAACT GTCCGGTGGT GAACAACAGC GAGTTGCACT GGCCCGGGCT
TTCAGTGGGC GGCCAAAAAT CTTATTTGCT GATGAGCCAA CCGGTAATCT TGACCGGCAG
ACGGGTGATC GTATCGCTGA TTTGCTGTTT TCCCTAAACC GGGATTTCGC GACCACGTTG
ATTCTGGTCA CACATGATGA ACAACTGGCC GGTCGTTGTC AGCGTCGGTT GCGCCTGAGG
GACGGTAAAT TGTGGGAGGA GTCATGA
 
Protein sequence
MPAENVLEVH HLNKHVGQGE QQLSILTGVE LVVKPAQTIA LIGESGSGKS TLLGILAGLD 
DGSSGDVSLL GQSLTTMDEE GRALLRAKNV GFVFQSFMLV PTLNTLENVQ LPALLRGESD
RQSKSQAIEL LEQLGLSKRL YHLPAQLSGG EQQRVALARA FSGRPKILFA DEPTGNLDRQ
TGDRIADLLF SLNRDFATTL ILVTHDEQLA GRCQRRLRLR DGKLWEES