Gene YpAngola_A1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1260 
Symbolfsr 
ID5799725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1316842 
End bp1318056 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content45% 
IMG OID641339226 
Productfosmidomycin resistance protein 
Protein accessionYP_001605796 
Protein GI162418274 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0237353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000222003 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGATC GTTCTGATAC CGGATGTCAG CAGCCCGTTA ATGTTTCAGT CAAACGTACA 
TCTTTCTCTA TTTTGGGTGC TATCAGCGTA TCTCACCTAC TCAACGATAT GATCCAGTCG
CTGATCCTGG CGATTTATCC TTTATTACAA GCTGAGTTCT CATTGAGTTT TGCTCAAATA
GGATTGATCA CGCTAACTTA CCAATTGACG GCTTCGTTAC TACAACCGCT GATTGGCTTA
TATACGGATA AACACCCCCA GCCATACTCA TTACCCATCG GTATGGGGTT CACGCTGTCT
GGCATATTAC TGCTGGCAGT AGCCACAACC TTCCCGGTGG TATTATTAGC GGCAGCATTG
GTCGGTACTG GCTCTTCTGT ATTCCACCCA GAATCATCAC GAGTCGCCCG TATGGCATCC
GGTGGGCGCC ATGGTTTGGC TCAATCTGTG TTTCAGGTGG GGGGGAATTT TGGCAGCGCA
CTCGGTCCGT TACTGGCCGC CATCATTATT GCCCCTTACG GTAAAGGCAA TGTGGGCTGG
TTTTCGCTCG CAGCCCTACT GGCAATTGTC GTGCTGTTGC AGGTGAGTAA ATGGTACAAA
CTGCAGCAAC GTGCTTCGTA TGGCAAAGTG TTAAAAATCT CATCAGCCAA AACACTACCA
AAAAATAAAA TTATCAGTAC GTTAGCCATC CTGATGGTGC TGATATTCTC TAAATACTTC
TATTTGACCA GCATTAGTAG CTATTACACC TTTTATTTAA TACATAAGTT TGGCGTTTCG
GTACAAAGTG CCCAGATACA CCTATTTGTT TTCTTATTTG CGGTTGCCGC CGGCACCATT
ATTGGTGGGC CTCTTGGTGA TAAGATTGGT AGAAAATATG TTATTTGGGG TTCTATACTC
GGTGTTGCCC CTTTTACCCT TGCTTTACCC TACGCGTCTT TGTATTGGAC GGGTATTTTA
ACCGTATTTA TTGGTGTTAT TCTCGCTTCC GCCTTTTCAG CAATACTGGT GTATGCTCAA
GAGCTTATCC CAGGGAAAGT CGGCATGGTA TCGGGTTTAT TCTTCGGTTT CGCTTTCGGT
ATGGGGGGAA TAGGTGCAGC AGTACTGGGG TATGTTGCTG ATTTAACCAG TATTGAACTG
GTTTATCAAA TATGTGCGTT CTTGCCATTA CTGGGAATAT TCACGGCCTT ACTGCCTAAT
TTGGACGATA AGTAA
 
Protein sequence
MTDRSDTGCQ QPVNVSVKRT SFSILGAISV SHLLNDMIQS LILAIYPLLQ AEFSLSFAQI 
GLITLTYQLT ASLLQPLIGL YTDKHPQPYS LPIGMGFTLS GILLLAVATT FPVVLLAAAL
VGTGSSVFHP ESSRVARMAS GGRHGLAQSV FQVGGNFGSA LGPLLAAIII APYGKGNVGW
FSLAALLAIV VLLQVSKWYK LQQRASYGKV LKISSAKTLP KNKIISTLAI LMVLIFSKYF
YLTSISSYYT FYLIHKFGVS VQSAQIHLFV FLFAVAAGTI IGGPLGDKIG RKYVIWGSIL
GVAPFTLALP YASLYWTGIL TVFIGVILAS AFSAILVYAQ ELIPGKVGMV SGLFFGFAFG
MGGIGAAVLG YVADLTSIEL VYQICAFLPL LGIFTALLPN LDDK