| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1239 |
|---|
| Symbol | |
|---|
| ID | 5799704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1291081 |
|---|
| End bp | 1293144 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641339210 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001605780 |
|---|
| Protein GI | 162419185 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.793158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.00100345 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAGG ATTCCTCTGC GTTAGCCTCT TTCTTTCGTT CTCATATCGC AAAAAATAAT
CAATACAGCC CCGACTGGGG CAAACACTAT CGTCAGCTCG TAGAACAGGT CCAAGCCGAA
AAACCCAACT TCTCTGCGGA TACAATTCGG CAGATTTGGT ACGAACGTAG CAATGGTATC
TCCAGCCTCA GGCAGGGCGG TATGTCCCAG TTTGAATTCG AAACGGCGCA AAAACAGCTG
CTCGCTCTCA CCCGTCAGAT GGCAGATGAG TGTACGCAGG AGAACTACGA TCGGGTGATT
GAGCGCCTTG TTAAACTTAA AACAGATGGG ATATTAAACA AAGTATATTG GGCACTTTGC
CATCGTGCCT TTGCCGCGCT CTACCCGTCG AAAATTACCA ACGTTGTGAA TGTCAGCAAT
TTTTTCAGCA GTTATAACTA TTGCAATAAC CATTTTCAAC TTGACCTTTC TGAGGATCAG
GAGTGGTTCG CTCGCAACCT TGATCTCAAG AAAGTGTTGC ATCGAGCATT GGGCGATGAT
GTCGATCCTA TCGAACTGAA TATGTCGCTC TGGCATCTCT ACACGCAGGT GATTCAGAAG
AAGAATGATA TTGGGTTAAT CGGTAGTGAG ACTGCCTTGC CAGAGGATGA GCAAGACGAG
GAGGTTACCA CTCCGCAACT GCCAAAAAAT ACTATCCTCT ACGGACCTCC AGGTACCGGT
AAAACTTACT GTACCATCGA GCTAGCCGTA CGCGCCTGCG AACCAGCAGC CTACTCGCTG
CAGGAAGGCA AAGAAGAGAA CGAAAAACGC CGTGAGCTGA AAAAGGTTTA TGACCGACTG
ATTGCTGAAA AGCGGGTGCG CTTTATCACC TTCCATCAGA GTTTTGGCTA TGAAGAGTTT
ATCGAAGGGC TAAGAGCAGA AACCACCGAT GATGGCAATG TACGCTATGA AGTCAAAGCG
GGCATTTTTA AGCAAATTTG TGAAGATGCT GCTTTTGGTC ACGCCGGTGT TCAGCAGAAG
CTTGACGAGG CGCTTGCCCG CCTACAAGAA CGTTTATCTG AAAGTGGAAG CATTACCCTT
GAAACGCTGC AGGGCAAAGC CTTCCAACTG GCTTACAAGA GCCAGACCAC CTTTGGTATT
TTCCCGTCGC AATCGAAAAA AGAGGATTTA GGGCAGGGTT ACAATGCTTA CCTCAAGAAT
ATCAGTCTGG TTTACCAAAA CCCTCAGGCA AAGGTACACA ATCCTTCATA TGTACGTAGT
ATCCTTAATT ACCTCATTAA ACAGGAAGGT TTGCCTTCCA ACCCACAGGA ATCTGTATCT
GAAAAACGGC AAAACTACGT TCTGATTATT GACGAGATTA ACCGTGGCAA CATCTCCAAA
ATCTTCGGCG AACTGATCAC CCTGATAGAA ACCTCTAAAC GTGCCGGGGA ACCGGAGGCG
CTTAGCGTGA TTCTGCCTTA CTCTTCCAGT TCGTTCAGCG TACCGAATAA TCTCTATTTA
ATCGGCACCA TGAACACTGC TGACCGTTCG CTCACCGCAC TGGATACCGC CCTGCGTCGC
CGATTCGAGT TTGAAGCGAT GCTGCCGGAT ATCACCGTTC TAAAAGAAAC TGTTGTCAAA
GGTATTGATC TGCCACGTCT ACTGCAGACC TTGAATGACC GCATTGAGGT GCTGTACGAC
AGAGAACATA CACTAGGCCA TGCCTTTTTC ATCCCAGTAG TTCAGGTAAA AGAGGACGAA
GACCTGGCAT TTGAAAGGCT TAAGCGGATC ATGCGAAACA AGGTGCTGCC TCTGTTGGAG
GAGTACTTCT ACAACGACTG GCAAAAAATT CGTATGGTGT TGGGCGACAA TCAGAAAAGC
GGAAACCCGC AGCTACAGTT CGTGTGCGAG GTGAAAGACC AGAAACAGTT TGCCGATCTT
TTTGGCAATA ACGGAACTGA AGATCTGCAT GATATAGGTG CCAGTTTCCA TCTAGCCCCT
GAGGACGACA AGGTTTGGGA TAACCCGCTC GCCTGGCAAC AAATTTATGC GCCACATAAA
GGTAACCCGG TGAGTGGGGA ATGA
|
|---|
| Protein sequence | MVQDSSALAS FFRSHIAKNN QYSPDWGKHY RQLVEQVQAE KPNFSADTIR QIWYERSNGI
SSLRQGGMSQ FEFETAQKQL LALTRQMADE CTQENYDRVI ERLVKLKTDG ILNKVYWALC
HRAFAALYPS KITNVVNVSN FFSSYNYCNN HFQLDLSEDQ EWFARNLDLK KVLHRALGDD
VDPIELNMSL WHLYTQVIQK KNDIGLIGSE TALPEDEQDE EVTTPQLPKN TILYGPPGTG
KTYCTIELAV RACEPAAYSL QEGKEENEKR RELKKVYDRL IAEKRVRFIT FHQSFGYEEF
IEGLRAETTD DGNVRYEVKA GIFKQICEDA AFGHAGVQQK LDEALARLQE RLSESGSITL
ETLQGKAFQL AYKSQTTFGI FPSQSKKEDL GQGYNAYLKN ISLVYQNPQA KVHNPSYVRS
ILNYLIKQEG LPSNPQESVS EKRQNYVLII DEINRGNISK IFGELITLIE TSKRAGEPEA
LSVILPYSSS SFSVPNNLYL IGTMNTADRS LTALDTALRR RFEFEAMLPD ITVLKETVVK
GIDLPRLLQT LNDRIEVLYD REHTLGHAFF IPVVQVKEDE DLAFERLKRI MRNKVLPLLE
EYFYNDWQKI RMVLGDNQKS GNPQLQFVCE VKDQKQFADL FGNNGTEDLH DIGASFHLAP
EDDKVWDNPL AWQQIYAPHK GNPVSGE
|
|---|
| |