Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1237 |
Symbol | ssuB |
ID | 5799702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1288517 |
End bp | 1289332 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641339208 |
Product | aliphatic sulfonates transport ATP-binding subunit |
Protein accession | YP_001605778 |
Protein GI | 162419259 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0017659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCACAC TGACTCATAT CCCGCAAGGG ACGCCAATAA CGTTGGAGTC GATCGGCAAA CGTTATGGTA ATCGTACTGT TTTAGATAAT CTGCAACTGC GTATCACCGC AGGACAATTT GTGGCAGTGG TTGGCCGCAG CGGCTGTGGA AAAAGTACGT TGTTACGTTT GCTCGCGGGG TTGGAAGCGG CCAGTGACGG AACACTGCTA AGTGGTAATG CTCTGCTCAG TCATGCCAAG GATGAGACTC GTCTGATGTT TCAGGAGGCT CGTTTGCTCC CGTGGAAAAA GGTGATTGAT AACGTGGGGC TGGGCTTGCG TGGCCACTGG CGTGATGAAG CGTTGCAGGT ATTGGACACC GTCGGGCTGG CAGATCGCGC CAATGAATGG CCCGCGGCAT TATCAGGCGG ACAAAAGCAA CGTGTTGCAC TGGCGCGGGC GCTGATCCAT CGCCCCCGTT TATTGTTGTT GGATGAACCG CTGGGCGCGT TGGATGCGTT GACCCGTATT GAGATGCAGG GCCTGATTGA ACGTCTCTGG CAACAGCATG GTTTCACCGT ATTGTTGGTG ACGCATGACG TGAGTGAAGC TATCGCACTG GCGGATCGCG TGCTGTTGAT TGAGGAGGGG CGTATTGGTT TGGATCTGGC TATCGATTTG CCGCGCCCAC GTCGCAAAGG ATCGGCGAAG CTGGCCGCGC TGGAGGCCGA GGTGTTGGAA AGAGTCTTGT CACCCCCCCA AGGCATTGAG GCATCACGCC AAGGCACTAA AGCGTCACGC CAAGGTACAG CAACATCACG GCGGGTGGCG AATTGA
|
Protein sequence | MTTLTHIPQG TPITLESIGK RYGNRTVLDN LQLRITAGQF VAVVGRSGCG KSTLLRLLAG LEAASDGTLL SGNALLSHAK DETRLMFQEA RLLPWKKVID NVGLGLRGHW RDEALQVLDT VGLADRANEW PAALSGGQKQ RVALARALIH RPRLLLLDEP LGALDALTRI EMQGLIERLW QQHGFTVLLV THDVSEAIAL ADRVLLIEEG RIGLDLAIDL PRPRRKGSAK LAALEAEVLE RVLSPPQGIE ASRQGTKASR QGTATSRRVA N
|
| |