Gene YpAngola_A1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1235 
Symbol 
ID5799700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1285897 
End bp1287252 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content53% 
IMG OID641339206 
Productxanthine/uracil permease family protein 
Protein accessionYP_001605776 
Protein GI162418391 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00207777 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAGCA GCAACCCTCA AGCACAGCCA AAGGGCACGC TTGATGCATT CTTTAAGCTT 
AGTGAACGTG GCAGTAATGT ACGCCAAGAA GTGCTGGCCG GTCTGACGAC TTTTCTGGCG
ATGGTTTATT CGGTGATTGT GGTACCGAGT ATGCTAGGCA AAGCCGGTTT CCCACCGACG
GCGGTGTTTG TCGCGACCTG CCTGGTTGCG GGTCTCGGTT CTCTGTTGAT GGGTCTGTGG
GCTAACCTGC CAATGGCTAT CGGTTGTGCC ATCTCACTGA CAGCATTTAC CGCGTTCAGT
CTGGTATTGG GCCAGCAAAT CAGTATCCCA GTGGCATTGG GTGCGGTCTT CCTGATGGGG
GTGCTGTTTA CCATTATCTC AGTAACCGGT ATCCGTTCGT GGATCCTGCG TAACTTGCCA
ATGGGGGTTG CGCACGGTAC GGGCATCGGT ATTGGTCTGT TCTTGCTGTT GATTGCCGCA
AACGGTGTCG GCTTGGTTAT CAAAAACCCG ATTGAAGGTT TACCGGTCGC GTTGGGGGCA
TTTACCTCTT TCCCGGTGAT AATGACCTTG CTGGGTCTGG CCGTGATTTT TGGTCTGGAG
AAACTGCGAG TGCCGGGGGG GATTTTACTG GTGATTGTCG CCATCTCGGT GATCGGCCTG
ATTTTTGATC CAAGCGTGAC CTATCAGGGT CTGTTCGCGA TGCCAAGTCT GGCGGATGCT
AACGGCGACT CTTTGATTTT CAGCCTTGAT ATCATGGGCG CTTTACAACC CGTGGTATTG
CCAAGCGTAC TGGCGTTAGT GATGACCGCG GTATTTGATG CGACCGGGAC TATCCGCGCG
GTTGCGGGGC AGGCTAACTT GTTGGATAAA GACGGCCAAA TCATCAGCGG TGGTAAAGCG
CTGACCACTG ACTCCGTCAG TAGCATTTTT GCGGGTTTGG TGGGGGCGGC ACCGGCGGCG
GTTTATATTG AATCGGCTGC TGGCACTGCA GCGGGCGGCA AAACTGGTTT GACGGCGACG
GTGGTCGGTA TCCTGTTCCT GTTGATTTTG TTCCTCTCGC CGCTGTCGTA TTTGGTTCCG
GCTTATGCCA CCGCTCCGGC GCTGATGTAT GTTGGCTTGC TGATGCTAAG CAATGTATCC
AAACTGGATT TCGAGGACTT TGTTGATGCC ATGTCCGGCC TACTGTGTGC GGTATTTATC
GTACTGACCT GCAATATCGT CACGGGTATT ATGTTGGGCT TTAGCTCACT GGTTATTGGC
CGGGTTTGCT CTGGTGAATG GCGCAAACTG AACGTCGGCA CGGTGATTAT TGCGGTTGCA
CTGGTTGCAT TCTACGCAGG TGGTTGGGCA ATTTAA
 
Protein sequence
MSSSNPQAQP KGTLDAFFKL SERGSNVRQE VLAGLTTFLA MVYSVIVVPS MLGKAGFPPT 
AVFVATCLVA GLGSLLMGLW ANLPMAIGCA ISLTAFTAFS LVLGQQISIP VALGAVFLMG
VLFTIISVTG IRSWILRNLP MGVAHGTGIG IGLFLLLIAA NGVGLVIKNP IEGLPVALGA
FTSFPVIMTL LGLAVIFGLE KLRVPGGILL VIVAISVIGL IFDPSVTYQG LFAMPSLADA
NGDSLIFSLD IMGALQPVVL PSVLALVMTA VFDATGTIRA VAGQANLLDK DGQIISGGKA
LTTDSVSSIF AGLVGAAPAA VYIESAAGTA AGGKTGLTAT VVGILFLLIL FLSPLSYLVP
AYATAPALMY VGLLMLSNVS KLDFEDFVDA MSGLLCAVFI VLTCNIVTGI MLGFSSLVIG
RVCSGEWRKL NVGTVIIAVA LVAFYAGGWA I