| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1215 |
|---|
| Symbol | |
|---|
| ID | 5799680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1262814 |
|---|
| End bp | 1264178 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641339186 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001605756 |
|---|
| Protein GI | 162418791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0268493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCT TAAGTGCTGA CTCTGCTATT ACAGCGGCAG AAAATGACCC ATTGAGAGAC
GTGAAAAGGA AAAATGCCAT TAAAGGCGCG TTCTTTTCCG AGTTTATAGA TATGTTCGAT
ATCTATCTGC CGGTTATTGT GTTGCCCCCC GTTTTGTTCT ATTTCCAGCC ACCTAATTTA
TCGAGCAGCA CCGCTAATAT CTTGGCTTCA CTGGTCTTTA TCACAACCCT GTTAGGCCGG
CCAATTGGCG CTTTACTGTT TGGGATTATG GCTGATCGTA TTGGTCGTCG TATGGCATCG
ATTTATTCAG TATCAGGATT TGGTGTGGTG ACATTTTTGA TTGCGCTCAT TCCTGGCTAC
GAAACACTGG GGATCGCCTC TTATCTGTTG TTGGTATTAC TGCGTTTTAT CGACGGCATT
TTTCTCGGCG GGGGATATAC CGGTGCGATA CCGCTTGCGC TCGAATATTC TAAAAAAGAA
CAGCGGGGAT TTGTCGGGGG GTTGATCCTC AGTGGTTTCC CTGCAGCCTA TGTCGCGATC
AATTTGGTGG CGATGCTGAT GTTCGCTCTG ATCCCACTGG ATGGGCTGTA TTCACCGTAT
GCGCAGTGGG GCTGGCGTAT CCCCTTTGTG ATTGGTGGGT TACTGGCCGG GTTCCTCGCC
CTGTATTACG TGTTTAATGT CACGGAATCT GAGGTGTGGC AACAAGGCAG CAGCAAGAAA
CGCGCACGTG AAAAACAGCC TTTATCAACC TTAGTCAGTG GACAAAGTGG GCGTAATTTA
TGGCAGGTAT TACTGATGAT GAGCGGTTTT TGGCTGACGC AAAATCTTAT CACCCTTTTT
CTCCCCACCG GGCTGCTAAT CAATACCCTG AATATGAGGG GGCTACAGGT GACATCGATC
TTGTTAGTGA CCTATTGCGT GCTTTTCTTC AGCTATATCG GCATGGGCAT GTTGGGGCAA
AAAATCGGGC GGCGGCGTTT CTTCATGATT GCAGGCCCCT TGATTGCAAC TATGGGGTCA
GCGCTGCTCT ACGTATTAAG TCATGGCGAT GGCTTATCAT TTAGTACCGT TATGCTGTTG
GTCTGTCTAT TGGCGGTAGT GGTGACCTCT CCCTGGGGGG TGATCATCAC GTATATTAAT
GAGCATTTCG CCACTGGCGT ACGGGCTACT GGGTTTGGTG TTGGGTTTAG CTTATCCGTC
ATCATTCCCT CTTTTTATGC TTTCTATATG GACTGGCTCA GTGTCGTGGT GCCCTTTGAA
CTGACTGCGG TGGTGTTACT GGCGCTGGGG GGGATGATAG GTACGGTGGG GGCCATTATG
GGGCCGGAAA CTAAAGAGGT CGATTTTACC TCGTCAGCGG GCTAA
|
|---|
| Protein sequence | METLSADSAI TAAENDPLRD VKRKNAIKGA FFSEFIDMFD IYLPVIVLPP VLFYFQPPNL
SSSTANILAS LVFITTLLGR PIGALLFGIM ADRIGRRMAS IYSVSGFGVV TFLIALIPGY
ETLGIASYLL LVLLRFIDGI FLGGGYTGAI PLALEYSKKE QRGFVGGLIL SGFPAAYVAI
NLVAMLMFAL IPLDGLYSPY AQWGWRIPFV IGGLLAGFLA LYYVFNVTES EVWQQGSSKK
RAREKQPLST LVSGQSGRNL WQVLLMMSGF WLTQNLITLF LPTGLLINTL NMRGLQVTSI
LLVTYCVLFF SYIGMGMLGQ KIGRRRFFMI AGPLIATMGS ALLYVLSHGD GLSFSTVMLL
VCLLAVVVTS PWGVIITYIN EHFATGVRAT GFGVGFSLSV IIPSFYAFYM DWLSVVVPFE
LTAVVLLALG GMIGTVGAIM GPETKEVDFT SSAG
|
|---|
| |