Gene YpAngola_A1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1175 
SymbolaaeB 
ID5799640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1210440 
End bp1212395 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content50% 
IMG OID641339148 
Productp-hydroxybenzoic acid efflux subunit AaeB 
Protein accessionYP_001605718 
Protein GI162420437 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00193331 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCACC CAAGCTTTAT TCGCCTGCGG TTTGCGTTCA AGCTGAGTTT TGCCATTGTG 
GCGGCATTAT TTCTTGGCTT TCATCTGCAA TTGGAAACAC CGCGTTGGTC AGTGCTTACT
GCCGCTATTG TTTCCGCCGG GCCTGCCTTC GCTGCAGGTG GCGAACCTTT CTCTGGTGCG
ATTCGCCACC GAGGTTGGTT ACGGATTATC GGCACCTTTA TCGGCTGTAT TGGGGGGCTG
GTCATTATTG TGCTGACCAT CAGAGCGCCA GTATTAACGT TGATGCTGTG TTGCCTATGG
GCTGGGATCT GTACGTGGAT TTCATCACTG GTACGGGTAG AAAATTCGTA TGCGTTCGGT
TTGGCCGGTT ATACCGCGTT AATCATCATT GTCACCACCG GTGAAACGCC ACTACTGACG
CCGCAATTTG CGGTTGAGCG CTGTAGCGAA ATTGTCCTCG GGATCGTCTG TGCGGTGATG
GCAGATCTGC TGTTTTCACC CCGCTCGATC AAACAGGATA TTGATCGATT GGTCGACAAG
GTGTTAGTGG ATCAGTACCG GCTCTTACAA CTCTGCATTC AGCCAGCAGA AAAAAGTGAG
ATTGATCGCG CTTGGAATGA ATTGGTTAAA AATACCACGT CACTCAATGG GATGCGCAGC
TATCTGATGA TGGAGTCTTC CCGTTGGCAG CGGTGTAATC GCCGTTTGCA GGTGTTACAT
ACCGAGTCTT TGGCGCTGAT CACGCAGGCG TGTGAAACCT ATCTGGTGAT GAGCAATCAC
CCAGAGGTGA TCAGTGCTGA ACTGAAAACT ATGCTGAGCG AACCCGCTCA AACTCCTGCA
GAGATCCACC AGCAGATGAA AAAACTGCGT CAGTTTATTG CTGCCAGCCA CAGTGAGGCG
ATCCCGCACA CCATCAGCAG TTGGGTTGGG GCAGCGACTC GCTATTTATT ACTGTCGAAA
GGGATCCAGA CCAACAGCAG CATCAATCAG GTCGAAGAGG ATATTTTGGC GGGTGATGCG
CCGGTTAAGC CCATTTCTGC CGAAGGCCAT CATGCGATGA TCAATGGCTT GCGTACCGGT
ATTGCCACGG CGATTGGTGG CCTGTTCTGG CTGTGGACCG GCTGGACATC CGGCGCGGGG
TGTATGGTGA TGATTGCAGT GGTCACTTCG CTGGCGATGC GAACACCGAA TCCACGGAGG
ATGGCGCTCG ATTTTCTGGT CGGCGTGATT ATCGCACTGC CCATCGGGGC GCTTTACTTT
ATGTTTATTA TCCCGTCGAC CCAGCAAAGT ATGCTGTTGC TCTGTATCAG CTTGGGGGTG
CTGGCATTTA TTATCGGCAT CGAAGTACAA AAACGGCGCT TGGGTTCACT GGGAACGCTG
GCTAGCACCA TAAATATTAT CGTGCTAAGT AATCCAATGA TATTTAATGT CCGCCAGTTT
CTCGATAGCG CATTAGGTCA AATTGTAGGC TGCTTTGTCT CTTTAATTGT CCTGCTGTTG
ATCCGTGACA ACGCGAAGGA CAGAACGGGC AGAACCTTAC TCAACCGTTT TGTTTACAGT
GCGGTCTCGG CCCTAACCAC CAATAAAACC AAGCGCGGCG AAAATCATCT ACCCGCGCTG
TATCAGCAAC TGAACCAGTT ATTGATGATG TTCCCGGCCG ATATTGATAA ATATCGTCTG
GCATTAACGC TGATTATTGC TCACCAGCGG TTAAACAGGA CTGAAATCCC GGTGAATGCG
GAGTTGAGCG CTTTTCATAA ACAGATCCGC TCTACCGCAG AGCGAGTGAT TACTGTCAAC
AATGACCAGA AACGGCGTTA TTATTTTGCC CGGTTATTGC AGGAACTGGA TCAATATCAA
CAGAAATTGG TGGATTATCA GGCTGCTGAT GCGGTTATCC GCCCGGTTAA GCGGTTGACT
GAGATGTTGC GTAAATATCA GAGTGCGCTG ATTTAA
 
Protein sequence
MTHPSFIRLR FAFKLSFAIV AALFLGFHLQ LETPRWSVLT AAIVSAGPAF AAGGEPFSGA 
IRHRGWLRII GTFIGCIGGL VIIVLTIRAP VLTLMLCCLW AGICTWISSL VRVENSYAFG
LAGYTALIII VTTGETPLLT PQFAVERCSE IVLGIVCAVM ADLLFSPRSI KQDIDRLVDK
VLVDQYRLLQ LCIQPAEKSE IDRAWNELVK NTTSLNGMRS YLMMESSRWQ RCNRRLQVLH
TESLALITQA CETYLVMSNH PEVISAELKT MLSEPAQTPA EIHQQMKKLR QFIAASHSEA
IPHTISSWVG AATRYLLLSK GIQTNSSINQ VEEDILAGDA PVKPISAEGH HAMINGLRTG
IATAIGGLFW LWTGWTSGAG CMVMIAVVTS LAMRTPNPRR MALDFLVGVI IALPIGALYF
MFIIPSTQQS MLLLCISLGV LAFIIGIEVQ KRRLGSLGTL ASTINIIVLS NPMIFNVRQF
LDSALGQIVG CFVSLIVLLL IRDNAKDRTG RTLLNRFVYS AVSALTTNKT KRGENHLPAL
YQQLNQLLMM FPADIDKYRL ALTLIIAHQR LNRTEIPVNA ELSAFHKQIR STAERVITVN
NDQKRRYYFA RLLQELDQYQ QKLVDYQAAD AVIRPVKRLT EMLRKYQSAL I