| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1163 |
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| Symbol | treB |
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| ID | 5799628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 1199861 |
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| End bp | 1201312 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641339137 |
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| Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
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| Protein accession | YP_001605707 |
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| Protein GI | 162420263 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.348607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGCAC GTAACCTTTA CGGAAAGGAC GATAAAATGG GCAAAGTAAA ACAGCAGGAT
ATCGATCAAC TGATCGTTCT GGTGGGAGGC AGAGAAAATA TTGCCACCGT CAGTCACTGC
ATTACTCGAT TACGTTTTGT ATTAAAAGAT CCGTCGATAG CATCACCAAA AGAGATTGAA
AATCTCTCAA TGGTCAAAGG CTGTTTTACT AATGCAGGCC AATTTCAAGT GGTCATCGGG
CCAGAAGTCG ATGATTACTA TAAAGCATTG ATTGCTAAGA TTGGCCAAAG TGAAGTGGAC
AAAGAACAGA CCAAGCTCGC GGCACGGCAG AACATGACTT GGTTTGAGCG CGGTATTTCT
CACTTTGCTG AGATCTTCTT CCCGTTGCTA CCGGCGCTGA TCAGCGGAGG GTTAATCCTC
GGCTTCCGTA ATGTCATCGG TGACATCCCA ATGTCTGAGG GGAAAACGCT GGCGCAGATG
TACCCCGCGT GGCAAACCAT TTATGACTTC CTCTGGTTAC TTGGCGAAGC CATCTTCTTC
TACTTGCCTG TCGCGATCTG CTGGTCAACA GTGAAGAAAA TGGGCGGGAC CCCGGTATTG
GGGATTGTAC TGGGGATCAC ACTGGTCTCT CCGCAATTGA TGAACTCCTA CTTACTGGGG
CAACAACTGC CTGACGTCTG GAACTTCGGT TGGTTTACCA TTGAAAAAGT GGGTTATCAG
GCACAGGTGA TCCCCTCTAT TTTGGCGGGT CTGGCGCTGG GGTGGATTGA AACCAACTTG
AAGAGAATCA TCCCCGCCTA TCTCTACCTG GTGGTCGTCC CTGTGGTCTC CCTGCTGCTA
GCCGTGTTCC TGGCCCATAC ACTGATTGGG CCGTTTGGCC GCATGATTGG TGACGGTGTG
GCATGGGGCG TGAAGGCGGT GATGACCGGC AGTTTCGCAC CGGTCGGTGC GGCACTATTT
GGTTTCCTGT ATGCACCGCT GGTGATTACT GGGGTACATC AGACCACGCT GGCTATTGAT
ATGCAGATGG TTCAGAGCAT GGGCGGCACA CCGGTCTGGC CATTGATTGC GTTGTCCAAC
ATCGCACAAG CTTCGGCGGT ACTGGGTATC ATCATCATCA GCCGTAAAAT CAATGAACGT
GAGATTTCAG TACCCGCAGC GATCTCCGCC TATCTGGGCG TGACCGAACC AGCAATGTAC
GGTATCAATC TGAAATACCG TTTCCCGATG TTATGCGCCA TGATCGGTTC CGCACTGGCT
GGCCTGATTT GTGGGTTGAC GGGAGTCATG GCGAACGGCA TCGGTGTGGG TGGGTTGCCC
GGTATTTTAT CTATCCAACC GCAGTTCTGG GGAATTTATG CCGTGGCGAT GTTAGTGGCC
ATCGTGGTGC CATTAGCACT GACCATTCTG GTGTATAAGC GTAAAGAGCG TCGTGGCGAA
TTGCCAGTCT GA
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| Protein sequence | MRARNLYGKD DKMGKVKQQD IDQLIVLVGG RENIATVSHC ITRLRFVLKD PSIASPKEIE
NLSMVKGCFT NAGQFQVVIG PEVDDYYKAL IAKIGQSEVD KEQTKLAARQ NMTWFERGIS
HFAEIFFPLL PALISGGLIL GFRNVIGDIP MSEGKTLAQM YPAWQTIYDF LWLLGEAIFF
YLPVAICWST VKKMGGTPVL GIVLGITLVS PQLMNSYLLG QQLPDVWNFG WFTIEKVGYQ
AQVIPSILAG LALGWIETNL KRIIPAYLYL VVVPVVSLLL AVFLAHTLIG PFGRMIGDGV
AWGVKAVMTG SFAPVGAALF GFLYAPLVIT GVHQTTLAID MQMVQSMGGT PVWPLIALSN
IAQASAVLGI IIISRKINER EISVPAAISA YLGVTEPAMY GINLKYRFPM LCAMIGSALA
GLICGLTGVM ANGIGVGGLP GILSIQPQFW GIYAVAMLVA IVVPLALTIL VYKRKERRGE
LPV
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