Gene YpAngola_A1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1063 
Symbol 
ID5799526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1086543 
End bp1087904 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content52% 
IMG OID641339049 
Producthypothetical protein 
Protein accessionYP_001605621 
Protein GI162419756 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.45317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGGCG GTAACTTTTC TGTGCCACCG AATCCGATCG TGGCCGAATT AGCCCAACCG 
CCGACCATAA AAAGTGATCA TGCTTATTCA TTGCCAGAAT TGATTGATAT CGCCCAACGT
CAGAATCCGG ATACCCGCAT TGCCTGGCAG CAAGCGCGAC AGGCAGCCCT TGCGGTAGGA
ATGGGGGAGG CGATATTTTT ACCGATCATT TCTGCCAGTG TCATTGGTGG CTACCAGCGT
ACGACCACAC CTCTGCCTTA TGCTATCGGC AACGAAAAGG ATCTGAAAAC AACCGGGAGC
GCGGTTATTC CTGCTTTGGC CTTACAGTGG CTTATCTTTG ATTTCGGCCA GCGCAGCGCG
TTGCTTGACG CCGCTAAACA GACGTCTTAT GCCGCTAATG TGACCTTCAA TGGCATGCAC
CAGAAACTGA TCTACGATGT GACACGCACT TACTTCCAAT ATGGTGCAGC ACAAGCCCAG
AGCCAGATAG CAAAACAAAC GTTGCAAAAC AGTCTAAAGA TTCAGGATGC TGCCGAGGAG
CGCCAGAAAA AGGGTATTGC GACAACGGTT GAAGTGGCGT TGGCACGCCA GCAAGTCGCA
CAGTCTCAGT TGCGTCGTGT GGTGGCAAAA GGTACTGAAC GTGATGCTTA TCAGGCATTA
TTAGGGGCGA TGGGTGTTTC TCCGTCATTG GATATCAAAG CCGCCTATAC CGAAGATCGT
GCTTTGCCGG ATGGGATAAG CGCCCCGACA GAAAAGATGA TCCAGTTGGC CCTCTCCCAG
CGGCCAGATG TTTTAGCCAG CTATGCGGCG GTCGAGGCAG CCAAGGCGGG TATCAAAGCC
ACTGAAGCCG ATTTCTTGCC AAAAGTCTAT CTGGCCGGGG CGGTTGCTGG TGGTGATGGG
CATTTTGATA TTCAGGGCCT ACCGGGTATC AGCCCGCAAA CTTCATCCTC TAGCATTTTA
GTCGGTGTCA GTGTTCCTCT GTACGATGGC GGGATACGCG CAGCCAGAGT TAAAGAGGCA
GAATCCCGCG CTGCTGTTGC TGCTGAAGGA TTTAAGAAAA CGCAGGAATT GGCGGTGCGC
GAAATTGTGG TAGCAGCAGA TACATTGCGC TCTGCGCTCG AATCCAATCA GGCGGCATTA
AATCTCGTGA AGACCTCGTT TATCTCCTAT GATGCGGCGC TGGAGTCTTA TCGCAGTGGT
GTTGGCACCA TAACGGTCGC CAATGAGGCG GCAAATGGTT TGTTGAATGC TCAACAAATG
AGTACTGATG CACATGCCGC CTCTTTGGTC GCCGCCGCCA ATCTGGCTTT CGTCATGGGT
AAAATGACCA ACACCTCACC ACCTTTGGAA CTGCTTCATT AG
 
Protein sequence
MGGGNFSVPP NPIVAELAQP PTIKSDHAYS LPELIDIAQR QNPDTRIAWQ QARQAALAVG 
MGEAIFLPII SASVIGGYQR TTTPLPYAIG NEKDLKTTGS AVIPALALQW LIFDFGQRSA
LLDAAKQTSY AANVTFNGMH QKLIYDVTRT YFQYGAAQAQ SQIAKQTLQN SLKIQDAAEE
RQKKGIATTV EVALARQQVA QSQLRRVVAK GTERDAYQAL LGAMGVSPSL DIKAAYTEDR
ALPDGISAPT EKMIQLALSQ RPDVLASYAA VEAAKAGIKA TEADFLPKVY LAGAVAGGDG
HFDIQGLPGI SPQTSSSSIL VGVSVPLYDG GIRAARVKEA ESRAAVAAEG FKKTQELAVR
EIVVAADTLR SALESNQAAL NLVKTSFISY DAALESYRSG VGTITVANEA ANGLLNAQQM
STDAHAASLV AAANLAFVMG KMTNTSPPLE LLH