| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1048 |
|---|
| Symbol | |
|---|
| ID | 5799511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1073271 |
|---|
| End bp | 1073783 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641339036 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001605608 |
|---|
| Protein GI | 162418868 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0777104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0145737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGATCA CTATTGCACC GTTCGTTACA ACAAGAAATC AAAAGGGGGT CCCAATGAGG
GATGAAAAGA GCTTAGCGCA CACCCGATGG AACTGTAAAT ATCATATAGT TTTTGCGCCG
AAGTACCGAA GGCAGGTGTT CTACAGGGAA AAACGCAGAG CGATTGGCAG TATTTTAAGA
AAACTGTGCG AATGGAAAAA CGTGAATATC CTGGAAGCAG AATACTGTGT GGATCACATC
CATATGCTTC TGGAGATCCC GCCCAAGATG AGTGTCTCGG GATTTATGGG GTACCTGAAG
GGAAAGAGCA GTCTGATGCT TTATGAGCAG TTTGGCGATT TGAAGTTCAA ATACCGTAAC
AGGGAGTTTT GGTGTCGAGG GTATTACGTT GATACGGTAG GGAAAAACAC GGCCAGGATA
CAAGAATACA TAAAGCACCA ATTGGAAGAG GATAAAATGG GTGAGCAACT CTCGAGCCCG
TATCCCGGTA GCCCGTTTAC GGGCCGTAAG TAA
|
|---|
| Protein sequence | MWITIAPFVT TRNQKGVPMR DEKSLAHTRW NCKYHIVFAP KYRRQVFYRE KRRAIGSILR
KLCEWKNVNI LEAEYCVDHI HMLLEIPPKM SVSGFMGYLK GKSSLMLYEQ FGDLKFKYRN
REFWCRGYYV DTVGKNTARI QEYIKHQLEE DKMGEQLSSP YPGSPFTGRK
|
|---|
| |