Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1038 |
Symbol | |
ID | 5799501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1063461 |
End bp | 1064315 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641339026 |
Product | regulatory protein AmpE |
Protein accession | YP_001605598 |
Protein GI | 162420202 |
COG category | [V] Defense mechanisms |
COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.363864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATTGT TTACGCTGTT ACTGGTGCTG GCATGGGAGC GCTTGTTTAA ACTGGGCGAA CATTGGCAGT TAGATCACCG CCTTGAAGTT GTATTTGCCC GATTGCAGCG ATTTTCCTTG ATACAAACCA TTTTGTTAAC TGTCCTATGG ATGGTGCTGG TTTGGGGGAT TTTGCAATTA GTGCAAAATA TTTTGTTTGG CTTCCCACTA TTATTGCTTT GGATCCTGAT TTGCCTAATG TGTATCGGTG CGGGGGGGAT TCGTAGGCAC TACCGAGCGT ATTTGAAAGC TGCTCGCCAA GGCGATATTC ATGCTACAGA TAAAATGGCA GAGGAACTCG CGCTAATTCA TGGTTTGCCC ATAGAAAGTG GTGAGAAGGA CCGTCTGCAA TCTTTGCAAA ATGCCTTACT GTGGATTAAC TTTCGCTACT ATTTAGCCCC TATTTTCTGG CTTATTGTAT GTGGCAGCTA TGGCCCTGTA GCGTTGGCTG GCTATGCCAT GCTACGAGGA TATCAAACGT GGTTAGCACG CCATCACACG CCTTTAGAGC GTGCTCAAAC GGGTATTGAC GGTATCTTGC ATTGGCTGGA TTGGGTTCCT GTGCGGTTAG TGGGCGTTGC CTATGCTTTG TTAGGGCATG GTGAAAGGGC TCTACCCGCT TGGCTGGCTT CATTAGGGGA TTTCCACTCT CAGCAATATC AGGTGCTGAC GCGGCTTGCT CAGTATTCTT TGGCTCGAGA ACCGCATTTA GATCCGGTGC AGACACCCCG CGCAGCGGTG TCTTTAGCCC GAAAAGTTAC ATTGACGATC ATTGTCGTCG TCGCATTACT GACGATTTAC GGCGCACTGG TTTAA
|
Protein sequence | MTLFTLLLVL AWERLFKLGE HWQLDHRLEV VFARLQRFSL IQTILLTVLW MVLVWGILQL VQNILFGFPL LLLWILICLM CIGAGGIRRH YRAYLKAARQ GDIHATDKMA EELALIHGLP IESGEKDRLQ SLQNALLWIN FRYYLAPIFW LIVCGSYGPV ALAGYAMLRG YQTWLARHHT PLERAQTGID GILHWLDWVP VRLVGVAYAL LGHGERALPA WLASLGDFHS QQYQVLTRLA QYSLAREPHL DPVQTPRAAV SLARKVTLTI IVVVALLTIY GALV
|
| |