| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1035 |
|---|
| Symbol | pdhR |
|---|
| ID | 5799498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1060004 |
|---|
| End bp | 1060840 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339023 |
|---|
| Product | transcriptional regulator PdhR |
|---|
| Protein accession | YP_001605595 |
|---|
| Protein GI | 162419040 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.778574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATTGG TATTACCAAT TGACTCCGCG CCACTCGCAG AGACGATTCA CTCAATACGG
CTTACACCAA ATATGGCCTA CAACAAAATA CGTCAACCCA AACTATCAGA TGTAATCGAG
CAGCAGCTCG AATACTTGAT CTTGGAAGGG ACGCTGCGTC CGGGTGAAAA GTTACTGCCT
GAACGTGAGT TGGCGAAGCA ATTTGATGTT TCCCGACCTT CTTTGAGAGA AGCTATTCAG
CGATTAGAGG CTAAAGGCTT GCTGTTGCGC CGTCAGGGAG GGGGTACCTT CGTTCAGACC
AATCTGTGGC AAAGCTTTAG CGATCCGTTA GCTGAACTGC TGGCAGACCA TCCAGAATCA
CAATTCGACC TGCTTGAAAC CCGTCATGCC CTTGAAGGTA TTGCCGCCTA TTACGCTGCA
TTACGTGGCA CTGATGAAGA TCTGCAACGT ATCCGTGAGT GCCATACTGT CATCCAGCAA
GCGCAGGATA ACGGTGATTT GGATGCTGAA GCCGATGCGG TGATGCAGTA TCAAGTGGCG
GTCACAGAGG CTGCACATAA TGTGGTCTTG CTGCATTTAC TCCGTTGCAT GGGGCCAATG
CTGGAACAAA ACGTCAGACA AAACTTTGAA TTGCTCTACT TGCGCCGCGA AATGTTGGCC
ACTGTGAGCA GTCACCGAGC CAGGATTTTC GAGGCGATTG TGGCACGTGA ACCAGAAAAA
GCACGAGAAG CATCGCACCG TCACTTGGCG TTTATTGAGG AGATTCTGTT GGATCTTAGC
CGGGAGCACA GTCGCCGTGA GCGATCTTTG CGTCGGCTCC AACAGCGCAA GGAGTAG
|
|---|
| Protein sequence | MKLVLPIDSA PLAETIHSIR LTPNMAYNKI RQPKLSDVIE QQLEYLILEG TLRPGEKLLP
ERELAKQFDV SRPSLREAIQ RLEAKGLLLR RQGGGTFVQT NLWQSFSDPL AELLADHPES
QFDLLETRHA LEGIAAYYAA LRGTDEDLQR IRECHTVIQQ AQDNGDLDAE ADAVMQYQVA
VTEAAHNVVL LHLLRCMGPM LEQNVRQNFE LLYLRREMLA TVSSHRARIF EAIVAREPEK
AREASHRHLA FIEEILLDLS REHSRRERSL RRLQQRKE
|
|---|
| |