Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0978 |
Symbol | sodC |
ID | 5799441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 999005 |
End bp | 999574 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641338968 |
Product | copper/zinc superoxide dismutase |
Protein accession | YP_001605540 |
Protein GI | 162421087 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAA GTACATTATT GCTACCTGTT ATTCTTTACT CCAGCGCAAC ACTGGCCGCT AACATGGCTG GCATGAATGA TAAGGCCAGC ATGAATGGTA AGGCTAGCAT GACTGTGAAA ATCAACGAAT CATTGCCACA AGGTAATGGG AAAGCGCTTG GCACCGTGAC GGTGACTGAA ACCGCTTATG GCTTACTGTT TACGCCACAT CTCACTGGGC TGGCTCCGGG AATTCACGGT TTCCATCTGC ATGAAAAACC CAGTTGTGCT CCGGGGATGA AAGATGGCAA GGCAGTGCCA GCATTGGCAG CCGGGGGGCA TCTTGACCCA AATAAGACCG GGGTACACCT TGGTCCTTAC AACGATAAAG GGCATCTGGG GGATCTGCCG GGATTGGTGG TTAATGCAGA TGGCACCGCC ACCTATCCCG TATTGGCTCC GCGCCTGAAA TCGTTGTCAG AGGTGAAACA GCATGCGTTA ATGATCCATG CTGGCGGTGA TAATTACTCT GATCATCCAA TGCCTTTAGG CGGTGGTGGC GCACGGATGG CATGTGGAGT CATTGAGTAA
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Protein sequence | MKLSTLLLPV ILYSSATLAA NMAGMNDKAS MNGKASMTVK INESLPQGNG KALGTVTVTE TAYGLLFTPH LTGLAPGIHG FHLHEKPSCA PGMKDGKAVP ALAAGGHLDP NKTGVHLGPY NDKGHLGDLP GLVVNADGTA TYPVLAPRLK SLSEVKQHAL MIHAGGDNYS DHPMPLGGGG ARMACGVIE
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