| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0962 |
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| Symbol | truD |
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| ID | 5799425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 983309 |
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| End bp | 984358 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641338954 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_001605526 |
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| Protein GI | 162421278 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGG AAAACCTGAC CTGGCTACAC GGTAAACCTA CGGCGAGCGG TATTTTAAAA
GCGAATCCGG AAGATTTTGT TGTCGTAGAG GATTTAGGAT TTGAACCGGA TGGGGAAGGT
GAGCATCTGC TGGTTCGTAT TCGTAAAAAT GGCTGCAATA CCCAATTCGT TGCTGATTAT
TTGGCGCGCT TTGCCAAACT TCATCCGCGG TTAGTGAGTT ATGCGGGGTT AAAAGACCGC
CATGCGGTCA CCGAACAGTG GTTTTGTTTA CACTTGCCAG GAAAAGAAGC GCCAGATCTG
GCCACCTTTG AGCTGGAAGG GTGTGAAGTA TTGGAAGCGG TGCGGCATAA AAGAAAATTA
CGTATTGGTT CACTGAAAGG CAATGCGTTT ACCTTAGTAC TGCGCCATAT TACGGATCGC
CAGGATGTGG AACAACGTTT ACAGCAAATA GCCGCCCAGG GCGTACCCAA CTATTTTGGT
AGCCAGCGGT TTGGCCGTGG TGGTAATAAT CTGGTGCAGG CCCGTTTATG GGCGAATAAT
GAAATTCGGG TAAAAGAACG CAGCAAACGT AGCTTTTATC TGTCTGCCAG TCGCAGCGCG
ATGTTCAATC TGATTAGCAG TTACCGCTTG GCGCAACAAC TGTCGACGAC GGTACTGGAG
GGTGATGCAT TACAATTATC CGGGCGTGGG AGTTGGTTTG TTGCTCAAGC GGATGAATTA
GCCGCGTTGC AACAGCGCGT TACTGCGGGT GAACTGAATA TCACCGCGCC TTTACCGGGG
GACAGTGAAC TGGGTACCCA CGGTGAAGCA TTAGCCTTTG AACAGGCGTG TTTGGCAGAG
CAAACTGAAT TACTGTCATT GATTAAGCGT GAGCGCGTTG AAGGTAGCCG CCGGGCAGTA
CTGCTAAAAC CGCAGAATAT GATAAGCAAC TGGTGGGATG ATGTCACTCT TGAGCTGAGT
TTCTGGCTCC CTGCGGGGAG CTTTGCGACC AGTGTGGTGA GGGAAATAAT GAACCAGGAT
CGGGCTGATG ATACGGATAT TATTGAGTAA
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| Protein sequence | MDMENLTWLH GKPTASGILK ANPEDFVVVE DLGFEPDGEG EHLLVRIRKN GCNTQFVADY
LARFAKLHPR LVSYAGLKDR HAVTEQWFCL HLPGKEAPDL ATFELEGCEV LEAVRHKRKL
RIGSLKGNAF TLVLRHITDR QDVEQRLQQI AAQGVPNYFG SQRFGRGGNN LVQARLWANN
EIRVKERSKR SFYLSASRSA MFNLISSYRL AQQLSTTVLE GDALQLSGRG SWFVAQADEL
AALQQRVTAG ELNITAPLPG DSELGTHGEA LAFEQACLAE QTELLSLIKR ERVEGSRRAV
LLKPQNMISN WWDDVTLELS FWLPAGSFAT SVVREIMNQD RADDTDIIE
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