| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0927 |
|---|
| Symbol | |
|---|
| ID | 5799390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 949278 |
|---|
| End bp | 950381 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641338920 |
|---|
| Product | carbohydrate ABC transporter periplasmic-binding protein |
|---|
| Protein accession | YP_001605492 |
|---|
| Protein GI | 162419907 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.582845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCACCAAA AAATAGCCAT ACAACAAAAA CAAGCCAATC TGCTTTATAT CAATATTATA
AAGCCGGCCT TACCTATTGC GCTTTCAGAG GATGTAATGA TGAGAAAGTT AATATTACCT
TGCTTAATAA CGACCTTGCT GGCTTCCCAT GCGGCGTGGT CTGCTGACAG CAACACACCA
CAAAAGGCGA ATAAGCCGTT TACCCTGGGT GTCGTGGTTA AAGTGGGGGG TATTCCTTGG
TTCAATGTAA TGGAGCAAGG TATCAAAGCG GAAGGTCAGG CATTGGGGGT TAACGCTTGG
CAGGTGGGGC CAACGACCGC AGATCCCGCT GAGCAAGTGC GGGCTATTGA AGACTTAATT
GCCAAAAAAG TCGATGTCAT CGGGGTGGTT CCTAATGATG CCAAAGTGTT GGAGCCCGTA
CTGAAGCGGG CGCAAGAAGC CGGTATTAAG GTTATCACGC ACGAGTCACC GGGTCAGATC
AACGCCGACT GGGATTTTGA ATTGCTCGAT ACCCAGAGCA TGGGTGCTAA CCATATGAAA
GATATGGCGC AGTGTATGGG TGAAGAAGGC AAATACGCCA TGTTTGTTGG CAGCCTGACC
GTGCCACTGG TCAATGAGTG GGCAGATGCC GCCATTGCTT ATCAAAAAGC CAATTACCCG
AAAATGGTGC TGGTTGAAGA CCGCTTCGGT GTCGCCGAGT CTGTCGATGA CTCCATGCGT
ACTGCCAATG ATTTGTTATC TAAACATAAA GATCTGAAAG GCATTATGTC TTTTGGTTCA
CAAGGCCCTA TTGGGGCTGG CCGGGCTATT GATAAGCGTA AAAAGAACGA TACCACCTGT
GTCTTCGGCA CCTTCACACC AGGCCAGGGC ATTAAGTTGC TGGAAAAAGG CGCCATTGAT
GGCGGTTACA TCTCCAACCC CATGGTCGCA GGTAAAGTCT TCGTCCAGGT CGCTACCGCC
ATGATGAATG GTGAGCCTAT CAAAGATGGC GTCAAACTGG GTGATATGGG CGAAATCAAA
ACCCAAGGCA ATACCATCCT CAGTGATAAC CCTGAAAAGC TGGATATCGA AAATACCAAA
CGTCTGGTGA AGCTCGGTTT ATAA
|
|---|
| Protein sequence | MHQKIAIQQK QANLLYINII KPALPIALSE DVMMRKLILP CLITTLLASH AAWSADSNTP
QKANKPFTLG VVVKVGGIPW FNVMEQGIKA EGQALGVNAW QVGPTTADPA EQVRAIEDLI
AKKVDVIGVV PNDAKVLEPV LKRAQEAGIK VITHESPGQI NADWDFELLD TQSMGANHMK
DMAQCMGEEG KYAMFVGSLT VPLVNEWADA AIAYQKANYP KMVLVEDRFG VAESVDDSMR
TANDLLSKHK DLKGIMSFGS QGPIGAGRAI DKRKKNDTTC VFGTFTPGQG IKLLEKGAID
GGYISNPMVA GKVFVQVATA MMNGEPIKDG VKLGDMGEIK TQGNTILSDN PEKLDIENTK
RLVKLGL
|
|---|
| |