Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0922 |
Symbol | dmsA |
ID | 5799385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 944095 |
End bp | 946545 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641338917 |
Product | anaerobic dimethyl sulfoxide reductase chain A |
Protein accession | YP_001605489 |
Protein GI | 162419143 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGA CCAACGAATC CCGGCTGTTA ACGACAGGTG TCACCCGCCG AAAACTGGTC CAAACCACGC TTGTCGGCGG ACTGGCTATG GCAACCGGGG CGTTTTCGTT ACCGTTCTCC CGTACCGCAC GAGCCGTTCA ATCCGCACTC AACCCCACCT CAGCCAACGA CGGTAAAGTG ATCTGGAGCG CCTGCACCGT TAACTGCGGC AGCCGCTGCC CGCTGCGTAT GCATGTGGCT GATGGCGAAA TAAAATATGT CGAAACGGAT AACACCGGCG ATGATGATTT TGAGGGGCTA CACCAGGTAC GCGCCTGTCT GCGAGGGCGG TCTATGCGCC GCCGGGTCTA TAACCCAGAC CGCTTAAAAT ACCCGATGAA ACGAATCGGT GCCCGTGGTG AAGGGAAATT CAAACGTATC TCGTGGGAAG AGGCATTCGA GACTATCGCT GGCAGCATGC AGAATATTAT CAAGGAATAT GGCAATGAAG CCATTTACCT GAATTACGGT ACCGGCACGA TAGGCGGCAC CATGACCCGC TCTTGGCCGC CGGGCGCGAC GCTCTTGGCT CGCTTGATGA ATTGCTGCGG TGGCTACCTC AACCAGTATG GTGATTACAG TACCGCACAG ATTGCCGCGG GACTCAATTA TACCTACGGT GGCTGGGCTG ACGGTAACAG CCCGTCCGAT ATCGAAAACA GTAAGCTGGT GGTGTTGTTC GGTAATAACC CGGCTGAAAC CCGGATGAGT GGCGGTGGGG TCACCTATTA TCTGGAGCAG GCACGAGAGA AATCCAATGC CAAAATGATC GTGATTGACC CCCGTTATAC CGACACCGCA GCAGGCCGTG AAGATGAATG GATCCCACTA CGACCAGGCA CTGATGCCGC ATTGGCCTCT GCGTTAGCTT ATGTGATGAT CACTGAAAAT CTGGTGGATC AACCCTTCCT TGACCAATAT TGCGTTGGTT ATGACGAGAA GACGCTACCA GAAGGCGCAC CCGAAAATAG TCACTACAAA GCCTATATTT TAGGGCAGGG CGCAGATAAA ACCGCCAAAA CCCCACAATG GGCAGCGGCT ATCACCGGTA TTCCCGCCGC AAAAATCATT ACGCTAGGCC GTGAAATAGG GTCAGTGAAG CCGGCTTATA TTTCCCAAGG TTGGGGGCCA CAACGTCATT CCAACGGCGA AAACACCAGC CGAGCCATTG CCATGTTGGC AATCTTGACC GGTAATGTCG GTATTAATGG CGGTAACTCC GGTGCTCGTG AAGGCTCCTA CAGCCTGCCG TTTGTCCGTA TGCCTACCTT TGAAAACCCA GTCAAAACCA GTATCTCTAT GTTCTTGTGG ACCGATGCCA TTGAGCGTGG ACCTGAAATG ACCGCCACCC GTGATGGGGT TCAGGGGAAA GATAAGCTGG ATGTCCCGAT CAAATTTATT TGGAACTACG CCAGTAACTG TTTGGTGAAT CAACATTCTG AAATCAATCG CACCCATGAC ATTCTGCAAG ACGATAAGAA ATGCGAAATG ATTGTGGTCA TTGATAACCA CATGACCTCG TCGGCTGAAT ATGCCGATAT TATCCTGCCA GACTGTACCG CTTCCGAGCA GATGGACTTC TGTCTGGATG CCTCCAGCGG CAATATGGCC TATGTCATTT TTGCTGATCA GGTGATTAAA CCGCGTTTTG AGTGCAAAAA TATTTATGAC ATCACCAGTG GATTGGCAAG ACACATGGGG GTCGAGCAGA AGTTTACCGA AGGGCGAACG CAAGAAGAGT GGATGCGCCA CCTCTATCAG CAATCGCAAG CTGCAATCCC TGAACTGCCT TCTTTCGAGG ATTTCCGCGC TCAGGGCATG TTTAAAAAAC GAGACCCGGC AGGCCATCAC GTTGCCTATC ACGATTTCCG CACCGATCCG GTTGCTAACC CACTGAGTAC CCCATCAGGC AAAATTGAGA TCTATTCTGC GGCGCTGGCC GAGATTGCCG CGACTTGGGA ACTGCAAAAA GATGATGTTA TCGATCCGTT GCCCGTGTAT GCCGCCGGTT TTGAAAGCCA TGTTGATCCA CTGATTGAAC AGTATCCGTT GCAATTAACC GGCTTCCACT ACAAGGCCAG AACCCACTCC ACCTACGGTA ACGTAGATGT GTTGAAAGCC TCCTGTCTTC AGGAGATGTG GATTAACCCG ATGGATGCTG AACGGCGAGG GATCAGCAAT GGCGATATGG TGCGGATCTT CAATGGCCGT GGTGAAGTAC AGATTAATGC CAAAGTCACT CCGCGCATGA TGCCGGGGGT TGTCGCTTTG GGTGAGGGGG CGTGGTACAG CCCCGATGCG AAGCGTATTG ATCGGGCGGG CAGTATCAAC GTATTGACCA CCCAGCGCCC CTCCCCGTTG GCGAAAGGGA ACCCATCCCA CACCAACCTC GTTCAAGTCG CCAAGGCATA A
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Protein sequence | MKETNESRLL TTGVTRRKLV QTTLVGGLAM ATGAFSLPFS RTARAVQSAL NPTSANDGKV IWSACTVNCG SRCPLRMHVA DGEIKYVETD NTGDDDFEGL HQVRACLRGR SMRRRVYNPD RLKYPMKRIG ARGEGKFKRI SWEEAFETIA GSMQNIIKEY GNEAIYLNYG TGTIGGTMTR SWPPGATLLA RLMNCCGGYL NQYGDYSTAQ IAAGLNYTYG GWADGNSPSD IENSKLVVLF GNNPAETRMS GGGVTYYLEQ AREKSNAKMI VIDPRYTDTA AGREDEWIPL RPGTDAALAS ALAYVMITEN LVDQPFLDQY CVGYDEKTLP EGAPENSHYK AYILGQGADK TAKTPQWAAA ITGIPAAKII TLGREIGSVK PAYISQGWGP QRHSNGENTS RAIAMLAILT GNVGINGGNS GAREGSYSLP FVRMPTFENP VKTSISMFLW TDAIERGPEM TATRDGVQGK DKLDVPIKFI WNYASNCLVN QHSEINRTHD ILQDDKKCEM IVVIDNHMTS SAEYADIILP DCTASEQMDF CLDASSGNMA YVIFADQVIK PRFECKNIYD ITSGLARHMG VEQKFTEGRT QEEWMRHLYQ QSQAAIPELP SFEDFRAQGM FKKRDPAGHH VAYHDFRTDP VANPLSTPSG KIEIYSAALA EIAATWELQK DDVIDPLPVY AAGFESHVDP LIEQYPLQLT GFHYKARTHS TYGNVDVLKA SCLQEMWINP MDAERRGISN GDMVRIFNGR GEVQINAKVT PRMMPGVVAL GEGAWYSPDA KRIDRAGSIN VLTTQRPSPL AKGNPSHTNL VQVAKA
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