Gene YpAngola_A0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0886 
Symbol 
ID5799348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp909039 
End bp909767 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content47% 
IMG OID641338881 
Productputative membrane protein, truncation 
Protein accessionYP_001605458 
Protein GI162421803 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0622559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCACG TATCAACTAG CTCATTGATC ATTATCTTAG TCATTATGAT CATCGTTTCA 
GCTTACTTCT CTGCATCCGA AACCGGCATG ATGACACTTA ACCGGTATCG GATGCGTCAC
TTATCCAAAC AAGGCAACCG TGCCGCACGT CGGGTGGAAA AGCTCCTGAA CCGCCCAGAT
CGCCTAATAA GTTTGGTACT GATTGGCAAT AATCTGGTTA ACATACTGGC ATCTGCGCTG
GCGACGATTG TCGGTATTCG TTTATACGGT GATGCCGGAG TTGCCATCGC AACCGGGGTG
CTAACTTTTG TGATCCTGAT TTTTGCTGAA GTCCTGCCAA AAACTATCGC TGCCCTTTAT
CCTGAACGTG TCGCATTCCC TAGCAGTATG CTCCTGGCCC CCCTGCAAAA GATCATGCTG
CCACTCGTGT GGCTACTGAA TACCATTACT CGCGGGTTGA TGCATTTATG TGGCATTAGA
GGAAATGTGC ACAGCAGTGA TGCGATGAGT AAAGATGAAT TACGCACGAT AGTGAGTGAG
TCCCAATCAA AAATCTCTCG CCGCAATCAA GACATGTTGA TTTCAGTATT AGATCTGGAG
AAAGTGACTG TCAGCGATAT CATGGTACCG CGTAATGAAG TCGTCGGTAT CGATATTAAT
GATGATTGGA AGTCAATCAT GCGCCAGCTT ACACACTCGC CCCATGTGTC AACGACGGAT
GAAAAGTGA
 
Protein sequence
MEHVSTSSLI IILVIMIIVS AYFSASETGM MTLNRYRMRH LSKQGNRAAR RVEKLLNRPD 
RLISLVLIGN NLVNILASAL ATIVGIRLYG DAGVAIATGV LTFVILIFAE VLPKTIAALY
PERVAFPSSM LLAPLQKIML PLVWLLNTIT RGLMHLCGIR GNVHSSDAMS KDELRTIVSE
SQSKISRRNQ DMLISVLDLE KVTVSDIMVP RNEVVGIDIN DDWKSIMRQL THSPHVSTTD
EK