Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0886 |
Symbol | |
ID | 5799348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 909039 |
End bp | 909767 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641338881 |
Product | putative membrane protein, truncation |
Protein accession | YP_001605458 |
Protein GI | 162421803 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0622559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGAGCACG TATCAACTAG CTCATTGATC ATTATCTTAG TCATTATGAT CATCGTTTCA GCTTACTTCT CTGCATCCGA AACCGGCATG ATGACACTTA ACCGGTATCG GATGCGTCAC TTATCCAAAC AAGGCAACCG TGCCGCACGT CGGGTGGAAA AGCTCCTGAA CCGCCCAGAT CGCCTAATAA GTTTGGTACT GATTGGCAAT AATCTGGTTA ACATACTGGC ATCTGCGCTG GCGACGATTG TCGGTATTCG TTTATACGGT GATGCCGGAG TTGCCATCGC AACCGGGGTG CTAACTTTTG TGATCCTGAT TTTTGCTGAA GTCCTGCCAA AAACTATCGC TGCCCTTTAT CCTGAACGTG TCGCATTCCC TAGCAGTATG CTCCTGGCCC CCCTGCAAAA GATCATGCTG CCACTCGTGT GGCTACTGAA TACCATTACT CGCGGGTTGA TGCATTTATG TGGCATTAGA GGAAATGTGC ACAGCAGTGA TGCGATGAGT AAAGATGAAT TACGCACGAT AGTGAGTGAG TCCCAATCAA AAATCTCTCG CCGCAATCAA GACATGTTGA TTTCAGTATT AGATCTGGAG AAAGTGACTG TCAGCGATAT CATGGTACCG CGTAATGAAG TCGTCGGTAT CGATATTAAT GATGATTGGA AGTCAATCAT GCGCCAGCTT ACACACTCGC CCCATGTGTC AACGACGGAT GAAAAGTGA
|
Protein sequence | MEHVSTSSLI IILVIMIIVS AYFSASETGM MTLNRYRMRH LSKQGNRAAR RVEKLLNRPD RLISLVLIGN NLVNILASAL ATIVGIRLYG DAGVAIATGV LTFVILIFAE VLPKTIAALY PERVAFPSSM LLAPLQKIML PLVWLLNTIT RGLMHLCGIR GNVHSSDAMS KDELRTIVSE SQSKISRRNQ DMLISVLDLE KVTVSDIMVP RNEVVGIDIN DDWKSIMRQL THSPHVSTTD EK
|
| |