Gene YpAngola_A0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0885 
Symbol 
ID5799347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp908176 
End bp908967 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content45% 
IMG OID641338880 
Producthypothetical protein 
Protein accessionYP_001605457 
Protein GI162421676 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.215466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGT TTTCCATTTT GGCTTTGCTT GCTTATTCGC TCAGCTTGGG GCTGATTATC 
CCAAGTCTGG TGCGGAAAAA TAGTGCTTAC CGGCGGTTAG CGCTGGTTTC TGCCGTCGTG
GCACTAGTGT GCCATGCTAT TGCCTTGAAA AATCAAATTT TTGATGTTGG CGTTGGTCAG
AATCTTACGT TACTGAACAT TGGTTCTATT GTTGGGCTGA TGATCTGTAC GATTATGACC
ATTGTCGCTT CACAAGGGCG TGGCTGGTTT TTACTCCCTA TTGTCTATAG CTTCGCCATG
ATCAATCTGG CGCTTGCCAG CCTGCTTCCA GGGGAGTTTA TTACCCATTT GGAAGCCAGC
CCAGAGATAT TTATCCACAT CGGTCTGGCG CTTTTTGCTT ATGCCACGCT TATCATCGCG
GCGCTGTATG CGCTACAACT GGCTTGGCTT GATTATCAGT TAAAACATAA GAAACTGACG
TTTAATGCTG ATATGCCGCC GTTAATGAGC ATTGAACGAA AAATGTTCCA TATCACCCAA
ATTGGGGTGG TATTACTTAC ACTGACACTT TGTACCGGTT TGCTTTATAT GGATAATCTC
TTCAGTAAAG AAAATGTCCA TAAAGCGGTG TTATCGATTA TGGCCTGGTT TGTCTATATC
GTTTTATTGT GGGGCCATTA TCATGAAGGT TGGCGTGGGC GTAGGGTCAT TTGGTTCAGT
TTTGCGGGCG CCTTTCTACT TACACTGGCT TATTTTGGTA GCCGTCTGGT CCAGGAAATT
ATGGTTCGCT AG
 
Protein sequence
MPVFSILALL AYSLSLGLII PSLVRKNSAY RRLALVSAVV ALVCHAIALK NQIFDVGVGQ 
NLTLLNIGSI VGLMICTIMT IVASQGRGWF LLPIVYSFAM INLALASLLP GEFITHLEAS
PEIFIHIGLA LFAYATLIIA ALYALQLAWL DYQLKHKKLT FNADMPPLMS IERKMFHITQ
IGVVLLTLTL CTGLLYMDNL FSKENVHKAV LSIMAWFVYI VLLWGHYHEG WRGRRVIWFS
FAGAFLLTLA YFGSRLVQEI MVR