| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0860 |
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| Symbol | lsrD |
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| ID | 5799322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 885394 |
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| End bp | 886395 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641338856 |
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| Product | autoinducer AI-2 ABC transporter permease LsrD |
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| Protein accession | YP_001605433 |
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| Protein GI | 162421251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCT ACCGACGTTA TGGATGGGAA CTGACTCTGG CGGCGCTGCT GGTGCTGGAA
ATCCTGCTAT TTGGTTTATC GAATTCGCGC ATGTTGGATA TCAATGTGCT GCTGTTCAGC
ACCAGTGATT TTATCTGCAT CGGGATCGTG GCGCTGCCAT TGACCATGGT GATTGTCAGT
GGCGGCATCG ATATTTCATT CGGTTCGACT ATCGGGTTGT GCGCCATATT TCTGGGCATT
GTATTTCAGG CGGGCGTGCC GATGAGTGTG GCTATCCCAC TGACAGTGCT CGTCGGCGCA
CTGTGTGGGT TAATTAATGC CGGATTGATC CTCTATACCG GCGTCAACCC CTTGGTCATC
ACGCTCGGCA CCCTGTATCT GTTCGGTGGC AGTGCCCTGC TGTTATCCGG CCTCTCCGGT
GCGACAGGCT ATGAAGGGAT TGGCGGTTTC CCGGCCGCTT TTACTGATTT CGCCAACCAA
ACCCTCTTCG GGCTGCCAAT CCCCCTGGTG ATATTTATGC TGTGTGTTCT GCTGTTCTGG
CTGCTGATGC ACCGTACTCA CAGCGGCCGC CACGTGTTCC TGATTGGACA AAGCAGCCGA
GTCGCCCGTT ACAGTGCCCT GCCCATCGCC CGCACCTTAT GCATGCTGTA TGCCATGACC
GGGGTGGCCT CAGCGATTTC CGCCATTCTG CTGGTGTCTT ATTTCGGCTC CGCACGCTCT
GATTTAGGTG CCTCATTCCT GATGCCGGCG ATCACCGCCG TGGTATTGGG AGGGGCCAAT
ATTTACGGGG GATCCGGCTC CATTCTTGGA ACTGCCTTGG CGGTATTACT GGTCGGGTAC
CTGCAACAAG GTCTGCAAAT GATTGGTACG CCAAACCAAA TTTCCAGTGC GCTGTCTGGG
GCATTGCTGA TTCTGGTGGT GGTTGGGCGA TCGATCAGTC TGCACAGGCA TTTGATTTAT
GAATGGCTAC AACGTCGTCG CAGTCGAAAG GCCTCTGCGT GA
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| Protein sequence | MNLYRRYGWE LTLAALLVLE ILLFGLSNSR MLDINVLLFS TSDFICIGIV ALPLTMVIVS
GGIDISFGST IGLCAIFLGI VFQAGVPMSV AIPLTVLVGA LCGLINAGLI LYTGVNPLVI
TLGTLYLFGG SALLLSGLSG ATGYEGIGGF PAAFTDFANQ TLFGLPIPLV IFMLCVLLFW
LLMHRTHSGR HVFLIGQSSR VARYSALPIA RTLCMLYAMT GVASAISAIL LVSYFGSARS
DLGASFLMPA ITAVVLGGAN IYGGSGSILG TALAVLLVGY LQQGLQMIGT PNQISSALSG
ALLILVVVGR SISLHRHLIY EWLQRRRSRK ASA
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