Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0840 |
Symbol | rsmC |
ID | 5799302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 864468 |
End bp | 865511 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641338837 |
Product | 16S ribosomal RNA m2G1207 methyltransferase |
Protein accession | YP_001605415 |
Protein GI | 162419874 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAT TAACCCCAGC CAGTGAAGTG ATACTGCGCC ATAGTGATGA ATTTATAGCC CGCCACGTCC TGTTTGCCGG TGATTTACAA GATGCGCTGC CAGCGCAATT TGATGCAGCC GGGGTGCGGG TTCACACCAA TCAATATCAC CACTGGCAAT TACTGAGCAA CACGCTGGAA GAGAATGTGC AATTCGGTCT TTTAGCCACG GCAGAAACTC TCGCAGCTTG CGACACCCTG ATTTACTACT GGCCCAAAAG CAAACAAGAA GCCCAATTCC AGTTGGCTAA CCTGCTTTCT ATACTGCCTG TTGGCACCGA TATTTTTGTT GTGGGTGAAA ACCGCAGTGG TGTACGCAGC GCAGAAGAAA TGTTGGCAGA CTTCGCGCAG TTAGCCAAGA TAGACAGCGC TCGCCGCTGT GGTTTGTACC ATGGCCGTTT AGACAAACAA CCCGAATTTG ATGCTGATGC CTGGTGGGAA AGCTATCAGG TCGGTGGTGT GACGGTCAAA ACATTGCCGG GTGTCTTCAG CCGCGATTCT CTGGATTCGG GTAGTCATCT GTTGCTGTCC ACCTTTAACG AGCCCTTTAA AGGCAGCGTA TTGGATGTCG GTTGTGGTGC TGGAGTATTA GCCTCGGTTC TGGCGCAGCA ATCGCCAAAA ATCAAATGGA CGTTGAGTGA TGTCAGTGCC GCAGCCATTG AAGCCAGCCG AGCCACATTG GCGGTGAATA ATATTGAGGC GCAAGTGATT GCCAGTAACG TCTATTCCGA CATCAAAGGC CGCTTTGAGA TGATCATTTC GAACCCGCCT TTCCATGATG GGATCCAAAC CAGCCTGACC GCCGCTGAGA TGCTGATCCG TGGAGCGACC GCCCACCTAC ATGTGGGGGG GAAATTACGC ATCGTAGCGA ACTCCTTCCT GCCGTATCCT GCCTTGCTGG ATGCCGCATT TGGTAGCCAC GAAGTGCTGG CACAGAATGG CCGCTTTAAA GTGTATCAGG CAACTGTCGG GCGTCCGCCA CGGGATCCGA AGAAAAAACG TTAA
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Protein sequence | MSALTPASEV ILRHSDEFIA RHVLFAGDLQ DALPAQFDAA GVRVHTNQYH HWQLLSNTLE ENVQFGLLAT AETLAACDTL IYYWPKSKQE AQFQLANLLS ILPVGTDIFV VGENRSGVRS AEEMLADFAQ LAKIDSARRC GLYHGRLDKQ PEFDADAWWE SYQVGGVTVK TLPGVFSRDS LDSGSHLLLS TFNEPFKGSV LDVGCGAGVL ASVLAQQSPK IKWTLSDVSA AAIEASRATL AVNNIEAQVI ASNVYSDIKG RFEMIISNPP FHDGIQTSLT AAEMLIRGAT AHLHVGGKLR IVANSFLPYP ALLDAAFGSH EVLAQNGRFK VYQATVGRPP RDPKKKR
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