| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0831 |
|---|
| Symbol | deoC1 |
|---|
| ID | 5799293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 855258 |
|---|
| End bp | 856055 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641338828 |
|---|
| Product | deoxyribose-phosphate aldolase |
|---|
| Protein accession | YP_001605406 |
|---|
| Protein GI | 162418695 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT TAACCGCCTG CGCGCATTTG AACGATTATG CTAAACGCGC ACTAAGTTTG
ATGGATTTAA CCACCCTGAA TGACGACGAT ACTGATGAAA AAGTGATCGC GCTCTGTCAT
CAGGCTAAAA GCCCGGCCGG TAATACCGCG GCAATTTGTA TTTATCCTCG CTTTATCCCG
GTTGCCCGTA AGGCGTTACG TGAGCAGGGC ACTCCTGAGA TCCGTATCGC AACGGTGACC
AACTTCCCTC ATGGCAATGA TGATGTTGCG ATTGCGTTGG CTGAAACCCG TGCTGCCATT
GCTTATGGTG CCGATGAAGT GGATGTGGTT TTCCCTTATC GCGCGTTAAT GGCCGGTAAC
GATAAAATTG GCTTCGAACT CGTGAAAACG TGTAAAGAAG CCTGCGCTGC GGCGAATGTA
TTACTGAAAG TCATCATTGA AACTGGCGAA CTTAAGCAAG CGCATTTAAT TCGTCAGGCC
TCTGAAATTG CAATCAAAGC GGGTGCCGAT TTTATTAAAA CTTCTACCGG TAAAGTGCCG
GTGAATGCCA CGTTGGAAAG TGCAGACATT ATGATCCGCA CTATCCGTGA GTTAGGCGTA
GGCGAAACGG TGGGCTTCAA ACCGGCTGGT GGTGTCCGTA CCGCAGAAGA TGCCGCGCAA
TTTTTGCAAT TGGCTGATCA ACTGATGGGG GAAGGCTGGG CTGATGCACG CCATTTCCGC
TTTGGCGCTT CCAGTCTACT CGCCAGTTTG CTGACCACAT TGGGTCACCA GAGTAACGCC
AACAGCAGCG GCTACTAA
|
|---|
| Protein sequence | MTDLTACAHL NDYAKRALSL MDLTTLNDDD TDEKVIALCH QAKSPAGNTA AICIYPRFIP
VARKALREQG TPEIRIATVT NFPHGNDDVA IALAETRAAI AYGADEVDVV FPYRALMAGN
DKIGFELVKT CKEACAAANV LLKVIIETGE LKQAHLIRQA SEIAIKAGAD FIKTSTGKVP
VNATLESADI MIRTIRELGV GETVGFKPAG GVRTAEDAAQ FLQLADQLMG EGWADARHFR
FGASSLLASL LTTLGHQSNA NSSGY
|
|---|
| |